| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908304
Identifier: 75908304
GI number: 75908304
Start: 2573906
End: 2574553
Strand: Direct
Name: 75908304
Synonym: Ava_2083
Alternate gene names: NA
Gene position: 2573906-2574553 (Clockwise)
Preceding gene: 75908303
Following gene: 75908306
Centisome position: 40.43
GC content: 49.54
Gene sequence:
>648_bases ATGAGTGAAAGTATGGCATTTATCGGCGGTGTCGCCGTGGCTGGACTGGCGGCTCTCTTGATGCTCAGAGGGACAGGTAA TTCCCTACAGCCTAACTTTGGTGTGGCTTCACAAATGCCGGCTAACTTAGTAGCGCCCCAGGTGCTGCCGCCCCAATACC CACCTTACGGGCAAGCACCATATTCTAACCCACAACCAGCCGCACCAAATCCTGTGCAAACCGTGGAATTAGAACGCTTA AAAATGGATTTTGAACGCTTAAAGAGTGACAACGAACAACTAAGAGCGCAAAACCAACAACTCCAATTCCAATTCCAAAA CTGGAACAATAGCCAGCAGATGCAGTTAGCCCAACAAAATACTCAAAGGGTAGCATCTGCTGCATTACAACCCCAAAGCT CTTGGTGGAATTCACCTATGGTCTGGGCTGTTGGTGGAGCAACTTTGACAATTGGCGGTGGTATTGTCGTCGCCGGTGTA CTGTCTTTATTCTCACCACGTTCACGCCCCACCCGTACAGTACAAGTTATTCACCCATACCAAGGCCCTACACCACCATT GGTTCCTGTACGTAGGGCTGAATTCCTACCCCCAGCAGGGATGGAAACAAGAAGGGTGGAAGCTCATGAGTATGACGAAA TGAGGTAA
Upstream 100 bases:
>100_bases TTTGGGTATTATGTGAATTAAGTAGGCTAAAAGATTATGAGTGTGAGAGTAGGTCAGTCAAACGTTATGGAATTTACATC GCAGATGAGGGGTAAAGGCG
Downstream 100 bases:
>100_bases GAAGGCAGGGGGCAGGGGGCAGGAGGAATAATACTTAATCTCTCTCCTTCTCTCCTACTCCCTACTGCTTAATTAATAAC CACCTTGAGGAAGTTCTGAA
Product: heterocyst differentiation-like protein
Products: NA
Alternate protein names: Heterocyst Differentiation Related Protein; Heterocyst Differentiation-Like Protein PatN
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MSESMAFIGGVAVAGLAALLMLRGTGNSLQPNFGVASQMPANLVAPQVLPPQYPPYGQAPYSNPQPAAPNPVQTVELERL KMDFERLKSDNEQLRAQNQQLQFQFQNWNNSQQMQLAQQNTQRVASAALQPQSSWWNSPMVWAVGGATLTIGGGIVVAGV LSLFSPRSRPTRTVQVIHPYQGPTPPLVPVRRAEFLPPAGMETRRVEAHEYDEMR
Sequences:
>Translated_215_residues MSESMAFIGGVAVAGLAALLMLRGTGNSLQPNFGVASQMPANLVAPQVLPPQYPPYGQAPYSNPQPAAPNPVQTVELERL KMDFERLKSDNEQLRAQNQQLQFQFQNWNNSQQMQLAQQNTQRVASAALQPQSSWWNSPMVWAVGGATLTIGGGIVVAGV LSLFSPRSRPTRTVQVIHPYQGPTPPLVPVRRAEFLPPAGMETRRVEAHEYDEMR >Mature_214_residues SESMAFIGGVAVAGLAALLMLRGTGNSLQPNFGVASQMPANLVAPQVLPPQYPPYGQAPYSNPQPAAPNPVQTVELERLK MDFERLKSDNEQLRAQNQQLQFQFQNWNNSQQMQLAQQNTQRVASAALQPQSSWWNSPMVWAVGGATLTIGGGIVVAGVL SLFSPRSRPTRTVQVIHPYQGPTPPLVPVRRAEFLPPAGMETRRVEAHEYDEMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23601; Mature: 23470
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESMAFIGGVAVAGLAALLMLRGTGNSLQPNFGVASQMPANLVAPQVLPPQYPPYGQAP CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC YSNPQPAAPNPVQTVELERLKMDFERLKSDNEQLRAQNQQLQFQFQNWNNSQQMQLAQQN CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHH TQRVASAALQPQSSWWNSPMVWAVGGATLTIGGGIVVAGVLSLFSPRSRPTRTVQVIHPY HHHHHHHHCCCCHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECC QGPTPPLVPVRRAEFLPPAGMETRRVEAHEYDEMR CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure SESMAFIGGVAVAGLAALLMLRGTGNSLQPNFGVASQMPANLVAPQVLPPQYPPYGQAP CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCC YSNPQPAAPNPVQTVELERLKMDFERLKSDNEQLRAQNQQLQFQFQNWNNSQQMQLAQQN CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCHHHHHHHHHH TQRVASAALQPQSSWWNSPMVWAVGGATLTIGGGIVVAGVLSLFSPRSRPTRTVQVIHPY HHHHHHHHCCCCHHCCCCCEEEEECCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEECC QGPTPPLVPVRRAEFLPPAGMETRRVEAHEYDEMR CCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA