| Definition | Anabaena variabilis ATCC 29413 chromosome, complete genome. |
|---|---|
| Accession | NC_007413 |
| Length | 6,365,727 |
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The map label for this gene is 75908291
Identifier: 75908291
GI number: 75908291
Start: 2562306
End: 2562707
Strand: Direct
Name: 75908291
Synonym: Ava_2070
Alternate gene names: NA
Gene position: 2562306-2562707 (Clockwise)
Preceding gene: 75908289
Following gene: 75908294
Centisome position: 40.25
GC content: 40.3
Gene sequence:
>402_bases ATGTCGTTTCTTGCTTTTGTTGAGCTTGCAATTTACTTAGTTAAATTTATGACACTCACTCAAGAACCACAAGTAGTTTT GTTTAAGCCCCAAGGCAGTATAGATTTGCAAGGTGGCTTGGCTTTGACTGAACAGATGACTCAGGCAGGGTCTCAACCGC ATCAACTTTGGGTACTTGATTTAGCGGAGGTAGATTTTATGGATAGCTCCGGATTAGTTTCACTAGTAAAAGGACTTACT TCAGCGCGCCAACTTGGTTGTCGCTTGATACTATGCAACGTACAAACTCCAGTCCGATTGATTTTGGAACTGACTCAGCT AGACTCTGTATTTGAAATTTTTGATAGCTACGAGGAAATCTTAACACTCGTCAACGATAGTAGTTTTGCTTTAGTAAGCT AA
Upstream 100 bases:
>100_bases TACGGCATGAATACTGACGGATAACTGGTCAACTGCATGATTGCTACACTCTGCTTATGCGAGTAGAGCAAAACTCGCAG ATAAGACTTAACCAGTATGA
Downstream 100 bases:
>100_bases TCTATAAAAATACGATAGATGTATGGCAATGTCAATATTAAGTGGTAACATCCAGCTATTAGCCATATTTATCCGCCATT GCCTGTAATCGCACCTATCG
Product: anti-sigma-factor antagonist domain-containing protein
Products: NA
Alternate protein names: Anti-Sigma Factor Antagonist
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MSFLAFVELAIYLVKFMTLTQEPQVVLFKPQGSIDLQGGLALTEQMTQAGSQPHQLWVLDLAEVDFMDSSGLVSLVKGLT SARQLGCRLILCNVQTPVRLILELTQLDSVFEIFDSYEEILTLVNDSSFALVS
Sequences:
>Translated_133_residues MSFLAFVELAIYLVKFMTLTQEPQVVLFKPQGSIDLQGGLALTEQMTQAGSQPHQLWVLDLAEVDFMDSSGLVSLVKGLT SARQLGCRLILCNVQTPVRLILELTQLDSVFEIFDSYEEILTLVNDSSFALVS >Mature_132_residues SFLAFVELAIYLVKFMTLTQEPQVVLFKPQGSIDLQGGLALTEQMTQAGSQPHQLWVLDLAEVDFMDSSGLVSLVKGLTS ARQLGCRLILCNVQTPVRLILELTQLDSVFEIFDSYEEILTLVNDSSFALVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14728; Mature: 14597
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: PS50801 STAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLAFVELAIYLVKFMTLTQEPQVVLFKPQGSIDLQGGLALTEQMTQAGSQPHQLWVLD CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCEEEEEE LAEVDFMDSSGLVSLVKGLTSARQLGCRLILCNVQTPVRLILELTQLDSVFEIFDSYEEI ECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTLVNDSSFALVS HHHHCCCCEEEEC >Mature Secondary Structure SFLAFVELAIYLVKFMTLTQEPQVVLFKPQGSIDLQGGLALTEQMTQAGSQPHQLWVLD HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCEEEEEE LAEVDFMDSSGLVSLVKGLTSARQLGCRLILCNVQTPVRLILELTQLDSVFEIFDSYEEI ECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH LTLVNDSSFALVS HHHHCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA