Definition Anabaena variabilis ATCC 29413 chromosome, complete genome.
Accession NC_007413
Length 6,365,727

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The map label for this gene is 75908157

Identifier: 75908157

GI number: 75908157

Start: 2406729

End: 2407283

Strand: Direct

Name: 75908157

Synonym: Ava_1936

Alternate gene names: NA

Gene position: 2406729-2407283 (Clockwise)

Preceding gene: 75908155

Following gene: 75908160

Centisome position: 37.81

GC content: 41.62

Gene sequence:

>555_bases
ATGGCTAAAGTTTTTGACCACATCACCAAAGAATTACAAGAATTTATTGCAGCCCAACACCTGTTTTTTGTAGCTTCTGC
ACCCCTGAGTCCTGATGGCCATGTGAATATGTCTCCCAAAGGACTAGACTGCTTTCGGATTCTTTCCCCTCATCAGGTAG
CTTACCTAGATTTAACAGGTAGTGGTAATGAAACCTCAGCCCATCTCCAAGAAAACGGGCGAATCACCTTAATGTTTTGC
GCTTTTGAAGGAGCGCCTCTAATTTTACGCCTCTATGGAAAAGGAGAGACAATTTTACCCAGTTCCCCTAATTGGGATTC
CTTGTACTCATTATTTCCTCCAATCCCTGGAACTCGGCAAATTATAGTTGCAGATATCGAACGTGTGCAAACTTCTTGTG
GTCTTGGTGTCCCACTGTATGAATATCAAGGACAAAGACAGGCTTTAGTTGATTGGGCAGAGAAAAAAGGAGTACAAGGA
GTTAATGACTATCGAAAGCAAAAAAATGTTGTGAGTATCGATGGTTTACCGACTCCACTCAGCAAATTATTTTAA

Upstream 100 bases:

>100_bases
GCAGGGCAGAGTACGGGTACTCCTGCGGAGAACTCGTAGAGTAGCAAGCTATAAAGAGGGGTTTCTAGAATCATTTACCA
GCACTTAATACTTACTATTT

Downstream 100 bases:

>100_bases
GCAGCCTGAGAAAATTTCAGTAAATATGTAGGTTCTTTTGCTACAAAGATGATCTTTGTCATAAATTAAGTAATTGCCGA
AAACAGAAAGCATTTACAAC

Product: pyridoxamine 5'-phosphate oxidase-like protein

Products: NA

Alternate protein names: Pyridoxamine 5-Phosphate Oxidase Family Protein; Pyridoxamine 5-Phosphate Oxidase-Like Protein; Signal Transduction Histidine Kinase; Pyridoxamine-Phosphate Oxidase; Pyridoxamine 5-Phosphate Oxidase Family

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFC
AFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQG
VNDYRKQKNVVSIDGLPTPLSKLF

Sequences:

>Translated_184_residues
MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFC
AFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQG
VNDYRKQKNVVSIDGLPTPLSKLF
>Mature_183_residues
AKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTGSGNETSAHLQENGRITLMFCA
FEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQIIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGV
NDYRKQKNVVSIDGLPTPLSKLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20345; Mature: 20213

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTG
CCHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCCCEEEEEEEEC
SGNETSAHLQENGRITLMFCAFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQ
CCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCE
IIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGVNDYRKQKNVVSIDGLPTPL
EEEHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCH
SKLF
HHCC
>Mature Secondary Structure 
AKVFDHITKELQEFIAAQHLFFVASAPLSPDGHVNMSPKGLDCFRILSPHQVAYLDLTG
CHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEECCCCCCCEEEECCCCEEEEEEEEC
SGNETSAHLQENGRITLMFCAFEGAPLILRLYGKGETILPSSPNWDSLYSLFPPIPGTRQ
CCCCCCCEEECCCCEEEEEEEECCCCEEEEEECCCCEECCCCCCHHHHHHHCCCCCCCCE
IIVADIERVQTSCGLGVPLYEYQGQRQALVDWAEKKGVQGVNDYRKQKNVVSIDGLPTPL
EEEHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCEEEECCCCCCH
SKLF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA