Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75676400

Identifier: 75676400

GI number: 75676400

Start: 2407938

End: 2408936

Strand: Direct

Name: 75676400

Synonym: Nwi_2215

Alternate gene names: NA

Gene position: 2407938-2408936 (Clockwise)

Preceding gene: 75676398

Following gene: 75676401

Centisome position: 70.78

GC content: 67.07

Gene sequence:

>999_bases
ATGAAGAACCTCCTCACCGACATTTCCGGGGTCCGTGTCGGCCACGCCGACGACGCACGGCTGGCGTCAGGCGTGACGGC
GGTGCTTTTCGACACCCCCGTGGTGGCGGCGATGGACGTGCGCGGCGGGGGGCCGGGCACCCGCGACAGCACCCTGCTCG
ATCCGGTCAACACGGTGGAGCGGATCGACGCGCTCGCGCTGTCAGGCGGCTCCGCTTTCGGAGTCGAGTCCGGCGGCGGC
GTTCAGGCCTGGCTCGCCGAACAGGGGCGCGGCTTCGTGATCGGCGACGCGACCGTCCCGATTGTGCCCGGCGCGGTGGT
GTTCGACCTCTTGAACGGTGGCGACAAGAAGTGGGGTCGTTTTGCGCCTTATCGCGATCTTGGCTACGCCGCCGCAGCGG
CGGCGGGAGAAGATTTCGCGCTCGGCAGCACCGGCGCCGGACTCGGCGCGACGACCGCCAATCTGAAAGGCGGCATCGGC
TCCGCTTCGGCGGCCACGCCCGGCGGCGTGAAAGTGGCGGCGCTCGCCGTGGTGAACGCCGTCGGCAGCGTCACAGTCGG
AGATGGCCCCTGGTTCTGGGCGGTGCCATTTGAAACCGGCGACGAATATGGCGGACGCGGGCTGCCGCCGTCGTTCACGC
CGGATATGCTGGCGATGCGATTGAAGGACGGCGCGACAGCGAAGGCCGGCGAGAATACCACGCTCGCCATCGTCGTCACC
GATGCCGTGCTCACCAAGCCGCAGGCCAGGCGGCTCGCGATAATGTCACAAACCGGTTTCGCACGGGCGATTTATCCGGT
TCACGCGCCGCTGGACGGCGATATCGTGTTCGCTGCCGCTACCGGAGACAAGCCCATCGATCCGTTCGTCGAATTGACCG
AACTCGGAATGATTGCGGCCAACACGGTGGCTCGCGCGATCGCGCGTGGCGTCTATGAAGCAAAAGCACTTCCGTTTCCG
GATGCATTGCCGGCATGGAAGGACCGGTTTGCGCGCTGA

Upstream 100 bases:

>100_bases
CCGCGACATTTGTGATCAGACGTGATCGATTGACCCGGCCTCGCGACTGCCGTCATCTGACAGCAACCCTTTTCCATCCG
CCCGCGAACGAGACTGAACC

Downstream 100 bases:

>100_bases
CCGCAATCGAGGCGCATAGGTTTTTCTCCTGAGCAAAGCGGTATGTATTTAAAGTATAGTTGGTGTATTTACGTGGATTA
ATCGACGTATTTAAGGTTAG

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG
VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG
SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT
DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP
DALPAWKDRFAR

Sequences:

>Translated_332_residues
MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG
VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG
SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT
DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP
DALPAWKDRFAR
>Mature_332_residues
MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVERIDALALSGGSAFGVESGGG
VQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGRFAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIG
SASAATPGGVKVAALAVVNAVGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT
DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAANTVARAIARGVYEAKALPFP
DALPAWKDRFAR

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 33763; Mature: 33763

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVE
CCCHHHHHCCEEECCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH
RIDALALSGGSAFGVESGGGVQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGR
HHHHHEECCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCC
FAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIGSASAATPGGVKVAALAVVNA
CCCCHHCCHHHHHCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT
HCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEE
DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAA
CHHHCCCCHHEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
NTVARAIARGVYEAKALPFPDALPAWKDRFAR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC
>Mature Secondary Structure
MKNLLTDISGVRVGHADDARLASGVTAVLFDTPVVAAMDVRGGGPGTRDSTLLDPVNTVE
CCCHHHHHCCEEECCCCCHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCHHHHHH
RIDALALSGGSAFGVESGGGVQAWLAEQGRGFVIGDATVPIVPGAVVFDLLNGGDKKWGR
HHHHHEECCCCEECCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHCCCCCCCCC
FAPYRDLGYAAAAAAGEDFALGSTGAGLGATTANLKGGIGSASAATPGGVKVAALAVVNA
CCCCHHCCHHHHHCCCCCEECCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHH
VGSVTVGDGPWFWAVPFETGDEYGGRGLPPSFTPDMLAMRLKDGATAKAGENTTLAIVVT
HCCEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEE
DAVLTKPQARRLAIMSQTGFARAIYPVHAPLDGDIVFAAATGDKPIDPFVELTELGMIAA
CHHHCCCCHHEEEEEECCCCEEEEEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH
NTVARAIARGVYEAKALPFPDALPAWKDRFAR
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]