| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yaiI [C]
Identifier: 75676337
GI number: 75676337
Start: 2349865
End: 2350338
Strand: Direct
Name: yaiI [C]
Synonym: Nwi_2152
Alternate gene names: 75676337
Gene position: 2349865-2350338 (Clockwise)
Preceding gene: 75676334
Following gene: 75676338
Centisome position: 69.07
GC content: 67.93
Gene sequence:
>474_bases TTGACCGCCATTCGCCTCTACGTTGACGCCGACGCCTGCCCGGTGAAGGACGAAATCTATCGCGTCGCGGAGCGGCACGG CGTGTCCGTCAGCGTGGTGGCGGGAGGATATATCCGCGTGCCCGACCACCCCTTGATCGAACGCATCGCGGCCGGGCCCG GCATGGATGCGGCCGACGACTGGATCGCGGAACGCGCCGGCAAGACCGATATCGTCATCACGGCGGACATTCCACTGGCG AGCCGATGCGTCAAAGCGGGCGCCAGCGTGATCGCGCCGAACGGAAAGCCATTCACGGAGCAGTCGATCGGAATGACGCT CGCCGTCCGCAACCTGATGACCGACCTGCGCGCGAGCGGCGAAATGACGGGCGGCCCGCGCTCGTTCCAGCCGAGGGATC GTTCGGCATTCCTCTCGGCGCTGGACCAGGCCATTCGCCGCATCCGGCGCGCCTGCGCGGCACGGCAGGGCTGA
Upstream 100 bases:
>100_bases GCACCTCTGCCGTCGAATTTAGACTTCCGCACCGTGCTCGCAATCCGCCTTCACATGGAGTAACACCCGCTGCCATGATG TCTGTGCAGCCGATCCGCCA
Downstream 100 bases:
>100_bases AGACGATGGCGCCGCCGCTCGTCCAGTTGAAGGATATCGCGCTGACGTTCGGCGGCACGCCGCTTTTGTCGGGCGTCGAA CTCACGGTATCTGAATCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTAIRLYVDADACPVKDEIYRVAERHGVSVSVVAGGYIRVPDHPLIERIAAGPGMDAADDWIAERAGKTDIVITADIPLA SRCVKAGASVIAPNGKPFTEQSIGMTLAVRNLMTDLRASGEMTGGPRSFQPRDRSAFLSALDQAIRRIRRACAARQG
Sequences:
>Translated_157_residues MTAIRLYVDADACPVKDEIYRVAERHGVSVSVVAGGYIRVPDHPLIERIAAGPGMDAADDWIAERAGKTDIVITADIPLA SRCVKAGASVIAPNGKPFTEQSIGMTLAVRNLMTDLRASGEMTGGPRSFQPRDRSAFLSALDQAIRRIRRACAARQG >Mature_156_residues TAIRLYVDADACPVKDEIYRVAERHGVSVSVVAGGYIRVPDHPLIERIAAGPGMDAADDWIAERAGKTDIVITADIPLAS RCVKAGASVIAPNGKPFTEQSIGMTLAVRNLMTDLRASGEMTGGPRSFQPRDRSAFLSALDQAIRRIRRACAARQG
Specific function: Unknown
COG id: COG1671
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0178 family
Homologues:
Organism=Escherichia coli, GI87081732, Length=148, Percent_Identity=40.5405405405405, Blast_Score=112, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2152_NITWN (Q3SQN5)
Other databases:
- EMBL: CP000115 - RefSeq: YP_318758.1 - STRING: Q3SQN5 - GeneID: 3674570 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_2152 - NMPDR: fig|323098.3.peg.1907 - eggNOG: COG1671 - HOGENOM: HBG363074 - OMA: PLASRCV - PhylomeDB: Q3SQN5 - ProtClustDB: PRK00124 - BioCyc: NWIN323098:NWI_2152-MONOMER - HAMAP: MF_00489 - InterPro: IPR003791
Pfam domain/function: PF02639 DUF188
EC number: NA
Molecular weight: Translated: 16819; Mature: 16687
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAIRLYVDADACPVKDEIYRVAERHGVSVSVVAGGYIRVPDHPLIERIAAGPGMDAADD CCEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCEEECCCCHHHHHHHCCCCCCCHHH WIAERAGKTDIVITADIPLASRCVKAGASVIAPNGKPFTEQSIGMTLAVRNLMTDLRASG HHHHHCCCCCEEEEECCCHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC EMTGGPRSFQPRDRSAFLSALDQAIRRIRRACAARQG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAIRLYVDADACPVKDEIYRVAERHGVSVSVVAGGYIRVPDHPLIERIAAGPGMDAADD CEEEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCEEECCCCHHHHHHHCCCCCCCHHH WIAERAGKTDIVITADIPLASRCVKAGASVIAPNGKPFTEQSIGMTLAVRNLMTDLRASG HHHHHCCCCCEEEEECCCHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHCC EMTGGPRSFQPRDRSAFLSALDQAIRRIRRACAARQG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA