| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676307
Identifier: 75676307
GI number: 75676307
Start: 2315712
End: 2316665
Strand: Direct
Name: 75676307
Synonym: Nwi_2121
Alternate gene names: NA
Gene position: 2315712-2316665 (Clockwise)
Preceding gene: 75676306
Following gene: 75676308
Centisome position: 68.07
GC content: 67.09
Gene sequence:
>954_bases ATGTCCAGACATGGCCGCAACGCTCGCGCCGGGACCGACCGGGCGAGCCTTTACGACGACATCACCAACAGGATTATCGC CGAGCTGGAGGCCGGGCGCGTGCCCTGGGTCCAACCCTGGGGAACGGCCGCTGCGAAAGCGCCGCTCGCCATGCCGGCGA ATGCTGCGACCGGCCGGCAATATTCCGGGATCAACGTGCTGATCCTGTGGGGCGCGGTCGTCGAGCATGGCTTCCCGGTC CAGAGCTGGCTGACGTTCCGCCAGGCGCTATCGCTCGGCGGCCATGTCCGCAAAGGCGAGCGCGGCACCACCGTCGTCTA CGCCGATCGCTTCATTCCAGACGACGAGAAGAAGCGCGCGCAGGAGACCGGCGAGGAAGCGCAGGCCATTCCGTTTCTCA AGCGCTTCACCGTGTTCAATGTCGCGCAGTGCGAGGAACTGCCCGACGACCTCGCCGTCGCGCCGCCCGCACCGGAACCC GGCCTGATCGAGCCGCGCGTCGAGGCGCTGATCAAGGCGACCGGTATCGATTTCCACATCGGCGGCGAACGCGCCTTCTA TGTGCCGGCGCAGGACTATGTGCAGGTGCCGCCGCCGCAGGCGTATTTCGAGACCATCAACTGGCACCGCACGGCCCTGC ATGAGCTCGGTCATGCGACGGGGCATGCGTCCCGCCTCGGCCGCGACCTGTCGGGCTCCTACGGCTCGAAGAAGTACGCC TTTGAAGAACTCGTCGCCGAGATGAACGCGGCCTTCTGCTGCGCCTCGCTCGGCATCACTCCGACGGTGCGCCACGCCGA TTACATCGGCTCGTGGCTGGACGTGCTGCGCGAGGACAATCGCGCCATCGTCCGCGCCGCATCGCAGGCCAGCAAGGCGG CCGACTGGCTGCTCGCCTTCCTCCCCGAAACCGAGACGGCCGTGGAATCCGTGAACAACAGGAGGGCGGCATGA
Upstream 100 bases:
>100_bases CCGCAACGCCCCCTATAGAGAGTGAGAGTGCGGACCGGGTTTGCCGTGACGGGTTGAGGGCTGGAGGAGAGGCCTCCGGC GCCCGTCGCGGAGAACCGCG
Downstream 100 bases:
>100_bases TCCTCCTGACAGACGACCTCCGCGAACGCCTGCTCGCCAACGGCCGCGATCGCGGCGCCGATCATGTGCCCGTTGTCAAG TTCTTCAACCCGCTGGGCCA
Product: antirestriction protein; ArdC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MSRHGRNARAGTDRASLYDDITNRIIAELEAGRVPWVQPWGTAAAKAPLAMPANAATGRQYSGINVLILWGAVVEHGFPV QSWLTFRQALSLGGHVRKGERGTTVVYADRFIPDDEKKRAQETGEEAQAIPFLKRFTVFNVAQCEELPDDLAVAPPAPEP GLIEPRVEALIKATGIDFHIGGERAFYVPAQDYVQVPPPQAYFETINWHRTALHELGHATGHASRLGRDLSGSYGSKKYA FEELVAEMNAAFCCASLGITPTVRHADYIGSWLDVLREDNRAIVRAASQASKAADWLLAFLPETETAVESVNNRRAA
Sequences:
>Translated_317_residues MSRHGRNARAGTDRASLYDDITNRIIAELEAGRVPWVQPWGTAAAKAPLAMPANAATGRQYSGINVLILWGAVVEHGFPV QSWLTFRQALSLGGHVRKGERGTTVVYADRFIPDDEKKRAQETGEEAQAIPFLKRFTVFNVAQCEELPDDLAVAPPAPEP GLIEPRVEALIKATGIDFHIGGERAFYVPAQDYVQVPPPQAYFETINWHRTALHELGHATGHASRLGRDLSGSYGSKKYA FEELVAEMNAAFCCASLGITPTVRHADYIGSWLDVLREDNRAIVRAASQASKAADWLLAFLPETETAVESVNNRRAA >Mature_316_residues SRHGRNARAGTDRASLYDDITNRIIAELEAGRVPWVQPWGTAAAKAPLAMPANAATGRQYSGINVLILWGAVVEHGFPVQ SWLTFRQALSLGGHVRKGERGTTVVYADRFIPDDEKKRAQETGEEAQAIPFLKRFTVFNVAQCEELPDDLAVAPPAPEPG LIEPRVEALIKATGIDFHIGGERAFYVPAQDYVQVPPPQAYFETINWHRTALHELGHATGHASRLGRDLSGSYGSKKYAF EELVAEMNAAFCCASLGITPTVRHADYIGSWLDVLREDNRAIVRAASQASKAADWLLAFLPETETAVESVNNRRAA
Specific function: Unknown
COG id: COG4227
COG function: function code L; Antirestriction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017113 - InterPro: IPR013610 [H]
Pfam domain/function: PF08401 DUF1738 [H]
EC number: NA
Molecular weight: Translated: 34729; Mature: 34598
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHGRNARAGTDRASLYDDITNRIIAELEAGRVPWVQPWGTAAAKAPLAMPANAATGRQ CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC YSGINVLILWGAVVEHGFPVQSWLTFRQALSLGGHVRKGERGTTVVYADRFIPDDEKKRA CCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHH QETGEEAQAIPFLKRFTVFNVAQCEELPDDLAVAPPAPEPGLIEPRVEALIKATGIDFHI HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE GGERAFYVPAQDYVQVPPPQAYFETINWHRTALHELGHATGHASRLGRDLSGSYGSKKYA CCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCHHHH FEELVAEMNAAFCCASLGITPTVRHADYIGSWLDVLREDNRAIVRAASQASKAADWLLAF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LPETETAVESVNNRRAA CCCHHHHHHHHHHCCCC >Mature Secondary Structure SRHGRNARAGTDRASLYDDITNRIIAELEAGRVPWVQPWGTAAAKAPLAMPANAATGRQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCC YSGINVLILWGAVVEHGFPVQSWLTFRQALSLGGHVRKGERGTTVVYADRFIPDDEKKRA CCCCEEEEEEHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHH QETGEEAQAIPFLKRFTVFNVAQCEELPDDLAVAPPAPEPGLIEPRVEALIKATGIDFHI HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEE GGERAFYVPAQDYVQVPPPQAYFETINWHRTALHELGHATGHASRLGRDLSGSYGSKKYA CCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHCCCCCCHHHH FEELVAEMNAAFCCASLGITPTVRHADYIGSWLDVLREDNRAIVRAASQASKAADWLLAF HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LPETETAVESVNNRRAA CCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]