Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75676262

Identifier: 75676262

GI number: 75676262

Start: 2271751

End: 2272782

Strand: Direct

Name: 75676262

Synonym: Nwi_2073

Alternate gene names: NA

Gene position: 2271751-2272782 (Clockwise)

Preceding gene: 75676260

Following gene: 75676266

Centisome position: 66.78

GC content: 61.43

Gene sequence:

>1032_bases
TTGATTCAACGCAGGATAGACCACTCGAGAGCCATTGCACTTTTCGCTTGCATCATGATGCTGATGTCGTCGATGACGCC
CGCGCGGGCCGACCGCACGATCACGGACATGGCTGGCCGTAGGGTGATTATTGCGGATCGAGTGGCGCGCGTGGCGACCA
TTGGCCCCGTCCCGGTGCTTAACAGCTTCGTGTTCGCGCTTGGTGAGGCGAGATCGCTTGTCAACGGTCTGCCGCCGAAC
CTATCCGGGCCACGCTGGCGCATGCAGTATCTTGTCGATCCCGATATCTCCCGACGCCCTGTACTACAGGGTGGCGGCGG
TGCTCCGCTGGTAGAAGGTTTGATCGAAACGAAGCCCGATATCGTCCTCACAATGGACCGGAGAAACGTCGATCTGGCGG
CTCGCGCCCGCACACCCGTGGTGTTTCTCGCATGGCGACAGCCGAATGACGTGAAGGCGGTGATGCGCCTGCTCGGCCAG
ATCTACGGCAAGACCGAAGCGGCGGAAGCCTATTGCAGCTACTTCGATATGACCCTGGGCAACATCAGCACGCGGCTGGC
GCAGCGGTCAACGCAACGGCCGCGGGTACTTTATGCCAATCTCAAGCGCATGACCCAACCACACCTGATTGCCGAGTGGT
GGATCGCTCAGGCCGGCGGCCGCAGCGTCACGGACGGCGATCGGCCGACCGAGGCGCTGACCTTCTCCCGCGAGCAGCTT
CTGGCATGGGACCCGGAAGTGATGATACTCAGTAACGCGGCCGAGGTCGCGGAAGCCTATGCCGATCCCCGCCTCAGCAC
CGTCTCGGCCATTCGCAATCGCCGCGTCGCCGCCATTCCGACGGGCGTGCACCTGTGGGGCAACCGCACCGTCGAAGAGC
CTCTGACCGTGCTGTGGGCGGCGCAACTCATCCACCCTGATCTGTTCAAGGATTGGGATATCAAGAAAGAAGTCGTCGCA
TTCTACGCGATGTTCTTCAAGACATCGTTGGCGAAGCCGGAAGTTGAAAGAATACTGAGTGGCCGCCCGTGA

Upstream 100 bases:

>100_bases
TATACAGATAGATATCTCGTATAGAATGGAACTCGTGCCGTCAAGCAGCGCGGCGACCGAAAACAACGCAATCTGTACTT
CGCGGTCAGGAGAACTGAAC

Downstream 100 bases:

>100_bases
TCAAGTTTACGCGCGAGTTGGCTCAAGACGCGCATCCAACGCGTGTTCCATTGTCGGAACGATCACCATCTGGCCCTCGA
CATCCGTCAGGGTCGAGACC

Product: periplasmic binding protein

Products: NA

Alternate protein names: Iron(III) Dicitrate-Biding Protein; ABC-Type Fe3+ Transport System Periplasmic Component; Membrane Component Of ABC-Transporter; Iron Chelate Uptake ABC Transporter; Lipopolysaccharide Biosynthesis Protein; Iron(III)-Siderophore ABC Transporter Periplasmic Subunit

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MIQRRIDHSRAIALFACIMMLMSSMTPARADRTITDMAGRRVIIADRVARVATIGPVPVLNSFVFALGEARSLVNGLPPN
LSGPRWRMQYLVDPDISRRPVLQGGGGAPLVEGLIETKPDIVLTMDRRNVDLAARARTPVVFLAWRQPNDVKAVMRLLGQ
IYGKTEAAEAYCSYFDMTLGNISTRLAQRSTQRPRVLYANLKRMTQPHLIAEWWIAQAGGRSVTDGDRPTEALTFSREQL
LAWDPEVMILSNAAEVAEAYADPRLSTVSAIRNRRVAAIPTGVHLWGNRTVEEPLTVLWAAQLIHPDLFKDWDIKKEVVA
FYAMFFKTSLAKPEVERILSGRP

Sequences:

>Translated_343_residues
MIQRRIDHSRAIALFACIMMLMSSMTPARADRTITDMAGRRVIIADRVARVATIGPVPVLNSFVFALGEARSLVNGLPPN
LSGPRWRMQYLVDPDISRRPVLQGGGGAPLVEGLIETKPDIVLTMDRRNVDLAARARTPVVFLAWRQPNDVKAVMRLLGQ
IYGKTEAAEAYCSYFDMTLGNISTRLAQRSTQRPRVLYANLKRMTQPHLIAEWWIAQAGGRSVTDGDRPTEALTFSREQL
LAWDPEVMILSNAAEVAEAYADPRLSTVSAIRNRRVAAIPTGVHLWGNRTVEEPLTVLWAAQLIHPDLFKDWDIKKEVVA
FYAMFFKTSLAKPEVERILSGRP
>Mature_343_residues
MIQRRIDHSRAIALFACIMMLMSSMTPARADRTITDMAGRRVIIADRVARVATIGPVPVLNSFVFALGEARSLVNGLPPN
LSGPRWRMQYLVDPDISRRPVLQGGGGAPLVEGLIETKPDIVLTMDRRNVDLAARARTPVVFLAWRQPNDVKAVMRLLGQ
IYGKTEAAEAYCSYFDMTLGNISTRLAQRSTQRPRVLYANLKRMTQPHLIAEWWIAQAGGRSVTDGDRPTEALTFSREQL
LAWDPEVMILSNAAEVAEAYADPRLSTVSAIRNRRVAAIPTGVHLWGNRTVEEPLTVLWAAQLIHPDLFKDWDIKKEVVA
FYAMFFKTSLAKPEVERILSGRP

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38343; Mature: 38343

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQRRIDHSRAIALFACIMMLMSSMTPARADRTITDMAGRRVIIADRVARVATIGPVPVL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHCCCHHHH
NSFVFALGEARSLVNGLPPNLSGPRWRMQYLVDPDISRRPVLQGGGGAPLVEGLIETKPD
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
IVLTMDRRNVDLAARARTPVVFLAWRQPNDVKAVMRLLGQIYGKTEAAEAYCSYFDMTLG
EEEEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NISTRLAQRSTQRPRVLYANLKRMTQPHLIAEWWIAQAGGRSVTDGDRPTEALTFSREQL
HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHH
LAWDPEVMILSNAAEVAEAYADPRLSTVSAIRNRRVAAIPTGVHLWGNRTVEEPLTVLWA
HCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHCCCEEECCCCEEECCCCCHHHHHHHHHH
AQLIHPDLFKDWDIKKEVVAFYAMFFKTSLAKPEVERILSGRP
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
>Mature Secondary Structure
MIQRRIDHSRAIALFACIMMLMSSMTPARADRTITDMAGRRVIIADRVARVATIGPVPVL
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHCCCHHHH
NSFVFALGEARSLVNGLPPNLSGPRWRMQYLVDPDISRRPVLQGGGGAPLVEGLIETKPD
HHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCC
IVLTMDRRNVDLAARARTPVVFLAWRQPNDVKAVMRLLGQIYGKTEAAEAYCSYFDMTLG
EEEEECCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
NISTRLAQRSTQRPRVLYANLKRMTQPHLIAEWWIAQAGGRSVTDGDRPTEALTFSREQL
HHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHH
LAWDPEVMILSNAAEVAEAYADPRLSTVSAIRNRRVAAIPTGVHLWGNRTVEEPLTVLWA
HCCCCCEEEECCHHHHHHHHCCCCHHHHHHHHCCCEEECCCCEEECCCCCHHHHHHHHHH
AQLIHPDLFKDWDIKKEVVAFYAMFFKTSLAKPEVERILSGRP
HHHHCCHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA