Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is yhbW [C]

Identifier: 75676260

GI number: 75676260

Start: 2267916

End: 2268998

Strand: Direct

Name: yhbW [C]

Synonym: Nwi_2071

Alternate gene names: 75676260

Gene position: 2267916-2268998 (Clockwise)

Preceding gene: 75676259

Following gene: 75676262

Centisome position: 66.66

GC content: 59.56

Gene sequence:

>1083_bases
ATGACCAATACCGTATACGCGCCGACCGCGAGCTCTGACGTTGAACGCTCAGGGCCTAACACCAACGACGCACCACAATC
CTTCAAGCTCGGACTATCCGGTTGTGGAGGTGGCCTTGAATCGATTTCGACCTCCCACATCCTCGATCTGGCCGAGAAGA
TCGAGGCTTTAGGCTTCACCGGGATTTGGCTCAACGAAGAACACTTCCAGGGCAGCATCGTGGAGGTCGAGGGGCGACGA
TGCCATTCGCCTCTGATACTGGCCTCGGCCATACTGGCGCGCACCACGCGCCTGCGTGTTGGATTCTCCGTATTGCTGGC
GGCGCTGCACAACCCGATCCGTCTTGCCGAGGAGATCGCGACGCTGGACGTTCTCTCTAATGGACGCGTCGATGTCGGCA
TTTCCCGCGGCAACAACCCCCGTTATCTCAATGCCTATGGCGTCAATCCCGAAGGCACCGCCGATCATTTCAAGGATATG
CTGACATTCCTGCCGCGCGCCTGGTCGGTGGGCAGGCTTCCATTCGGCGATGCCGCTCACTCGATCGAGCCGAAACCGAT
TCAGTCGCCGCACCCGCCGATCTATGTCGGCACCAACACCAACGAAACTGCCGCCTGGGCAACGAAAAGCGGTCACAAGA
TCATCTGCCACGGCATTATCAGCATGCCTAACCAGCGCCGTTTGATGCGCGCATATGTCGACGCCGGCGGGAATCCAGCG
GAAGTGCCGTTCGGCCGCTTCGTCTATGTCAGCGAGACCGATGCTTCGGCGCGCAAGGAGTTATGGCCGACCATCGAGAA
ACTGACCACACGGTTGAAGGGATTCGGTCTGTTCAGGCGCGATGGCGTGATCGACGAAGCGGGCCTGGAGCCAGATAATT
TCTATCGCGAGATGGTGATCACCGGCTCGCCCGAGACCTGCGCCGAGAAGTTCATGGCGCTGCATGGCGAGCTTGGCGTA
ACCTACCTCAACGCCCTCTCCGCCTTCTTCGGATTCCTGCCGCTCGATCATCTCGAACGATCGCTTGACCTGATGGGGAG
CGTGCTGCGACCAAAACTCGAAAGAGCGTTGGCGGCCACCTGA

Upstream 100 bases:

>100_bases
CATGCCGAGTTCTGCTCACGATTATCGCTATATCTGAACACAGATATCGATCGCGTCGGAACTTATTTCCTACAGTTCTT
CACATACGAGACAGTTCCCG

Downstream 100 bases:

>100_bases
TACAGCAGAGAGTCAGAAACGGTACGCCACACAACTCGCATGTGTCGTACCGTTCTGTGTTGTCAGAATTTCATCGACAG
TGATCCGACAACCGTTCGCG

Product: luciferase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 360; Mature: 359

Protein sequence:

>360_residues
MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRR
CHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDM
LTFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA
EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGV
TYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT

Sequences:

>Translated_360_residues
MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRR
CHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDM
LTFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA
EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGV
TYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT
>Mature_359_residues
TNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRRC
HSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDML
TFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPAE
VPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGVT
YLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 39240; Mature: 39109

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFT
CCCCEECCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
GIWLNEEHFQGSIVEVEGRRCHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIA
EEEECHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDMLTFLPRAWSVGRLPFGDAAH
HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA
CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC
EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHEEEEEE
TGSPETCAEKFMALHGELGVTYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFT
CCCEECCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE
GIWLNEEHFQGSIVEVEGRRCHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIA
EEEECHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
TLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDMLTFLPRAWSVGRLPFGDAAH
HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
SIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA
CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC
EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVI
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHEEEEEE
TGSPETCAEKFMALHGELGVTYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT
ECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]