| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yhbW [C]
Identifier: 75676260
GI number: 75676260
Start: 2267916
End: 2268998
Strand: Direct
Name: yhbW [C]
Synonym: Nwi_2071
Alternate gene names: 75676260
Gene position: 2267916-2268998 (Clockwise)
Preceding gene: 75676259
Following gene: 75676262
Centisome position: 66.66
GC content: 59.56
Gene sequence:
>1083_bases ATGACCAATACCGTATACGCGCCGACCGCGAGCTCTGACGTTGAACGCTCAGGGCCTAACACCAACGACGCACCACAATC CTTCAAGCTCGGACTATCCGGTTGTGGAGGTGGCCTTGAATCGATTTCGACCTCCCACATCCTCGATCTGGCCGAGAAGA TCGAGGCTTTAGGCTTCACCGGGATTTGGCTCAACGAAGAACACTTCCAGGGCAGCATCGTGGAGGTCGAGGGGCGACGA TGCCATTCGCCTCTGATACTGGCCTCGGCCATACTGGCGCGCACCACGCGCCTGCGTGTTGGATTCTCCGTATTGCTGGC GGCGCTGCACAACCCGATCCGTCTTGCCGAGGAGATCGCGACGCTGGACGTTCTCTCTAATGGACGCGTCGATGTCGGCA TTTCCCGCGGCAACAACCCCCGTTATCTCAATGCCTATGGCGTCAATCCCGAAGGCACCGCCGATCATTTCAAGGATATG CTGACATTCCTGCCGCGCGCCTGGTCGGTGGGCAGGCTTCCATTCGGCGATGCCGCTCACTCGATCGAGCCGAAACCGAT TCAGTCGCCGCACCCGCCGATCTATGTCGGCACCAACACCAACGAAACTGCCGCCTGGGCAACGAAAAGCGGTCACAAGA TCATCTGCCACGGCATTATCAGCATGCCTAACCAGCGCCGTTTGATGCGCGCATATGTCGACGCCGGCGGGAATCCAGCG GAAGTGCCGTTCGGCCGCTTCGTCTATGTCAGCGAGACCGATGCTTCGGCGCGCAAGGAGTTATGGCCGACCATCGAGAA ACTGACCACACGGTTGAAGGGATTCGGTCTGTTCAGGCGCGATGGCGTGATCGACGAAGCGGGCCTGGAGCCAGATAATT TCTATCGCGAGATGGTGATCACCGGCTCGCCCGAGACCTGCGCCGAGAAGTTCATGGCGCTGCATGGCGAGCTTGGCGTA ACCTACCTCAACGCCCTCTCCGCCTTCTTCGGATTCCTGCCGCTCGATCATCTCGAACGATCGCTTGACCTGATGGGGAG CGTGCTGCGACCAAAACTCGAAAGAGCGTTGGCGGCCACCTGA
Upstream 100 bases:
>100_bases CATGCCGAGTTCTGCTCACGATTATCGCTATATCTGAACACAGATATCGATCGCGTCGGAACTTATTTCCTACAGTTCTT CACATACGAGACAGTTCCCG
Downstream 100 bases:
>100_bases TACAGCAGAGAGTCAGAAACGGTACGCCACACAACTCGCATGTGTCGTACCGTTCTGTGTTGTCAGAATTTCATCGACAG TGATCCGACAACCGTTCGCG
Product: luciferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRR CHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDM LTFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGV TYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT
Sequences:
>Translated_360_residues MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRR CHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDM LTFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGV TYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT >Mature_359_residues TNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFTGIWLNEEHFQGSIVEVEGRRC HSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIATLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDML TFLPRAWSVGRLPFGDAAHSIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPAE VPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVITGSPETCAEKFMALHGELGVT YLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 39240; Mature: 39109
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFT CCCCEECCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE GIWLNEEHFQGSIVEVEGRRCHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIA EEEECHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDMLTFLPRAWSVGRLPFGDAAH HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC SIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVI CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHEEEEEE TGSPETCAEKFMALHGELGVTYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT ECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNTVYAPTASSDVERSGPNTNDAPQSFKLGLSGCGGGLESISTSHILDLAEKIEALGFT CCCEECCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCE GIWLNEEHFQGSIVEVEGRRCHSPLILASAILARTTRLRVGFSVLLAALHNPIRLAEEIA EEEECHHHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH TLDVLSNGRVDVGISRGNNPRYLNAYGVNPEGTADHFKDMLTFLPRAWSVGRLPFGDAAH HHHHHCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC SIEPKPIQSPHPPIYVGTNTNETAAWATKSGHKIICHGIISMPNQRRLMRAYVDAGGNPA CCCCCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCCCC EVPFGRFVYVSETDASARKELWPTIEKLTTRLKGFGLFRRDGVIDEAGLEPDNFYREMVI CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHEEEEEE TGSPETCAEKFMALHGELGVTYLNALSAFFGFLPLDHLERSLDLMGSVLRPKLERALAAT ECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]