| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is queF
Identifier: 75676019
GI number: 75676019
Start: 2001574
End: 2002050
Strand: Direct
Name: queF
Synonym: Nwi_1828
Alternate gene names: 75676019
Gene position: 2001574-2002050 (Clockwise)
Preceding gene: 75676017
Following gene: 75676023
Centisome position: 58.83
GC content: 61.84
Gene sequence:
>477_bases ATGCCCAGAAAGCCCCCCTCTTCGCCGAAATCCTCGCCTTTGCAGCTTGGCCGCGCCGTGGCGTGGCCTGATTCTCCGGA GCAGGCAAAACTCGACCGCGTGCCCAATCCACAGAAGGGCACCAACTACGTCGCGCGGTTCACGGCGCCGGAATTCACCG CGCTGTGCCCGGTCACCGGCCAGCCGGATTTTGCCCATTTGGTCATCGACTATGTGCCGGGGTCCTGGCTGCTGGAATCA AAATCGCTCAAGCTGTATCTCGCCAGTTTTCGCAATCACGGGGCCTTCCACGAGGATTGCACTGTGGCGATCGGCAAGCG CATCGTCGCCGCGATCAAACCGAAATGGCTGCGTATCGGCGGCTACTGGTTTCCGCGCGGCGGTATTCCCATTGATGTGT TCTGGCAGACCGGAGCAGCGCCCAGGGGTGTCTGGATTCCCGATCAGGATGTGCCATCTTACCGAGGCCGGGGCTGA
Upstream 100 bases:
>100_bases CGAGAGCCTTTCCGCTTCCGACCAAATCAAAAGCGGGGCTTCATGATTCTGATCTAAAATCGGCTTCCACTTGGCCGACC CCGCTTGGACAGAGACGATC
Downstream 100 bases:
>100_bases AAGGCGCGCGCCACCCGCGCATGCCGCTGCCGTCAGAAACCGATCGTTAGCGAAGCACTGAGACTCGCGCGCCAGACATC GTCGATCCTGTAGGGATTGA
Product: 7-cyano-7-deazaguanine reductase
Products: NA
Alternate protein names: 7-cyano-7-carbaguanine reductase; NADPH-dependent nitrile oxidoreductase; PreQ(0) reductase
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPRKPPSSPKSSPLQLGRAVAWPDSPEQAKLDRVPNPQKGTNYVARFTAPEFTALCPVTGQPDFAHLVIDYVPGSWLLES KSLKLYLASFRNHGAFHEDCTVAIGKRIVAAIKPKWLRIGGYWFPRGGIPIDVFWQTGAAPRGVWIPDQDVPSYRGRG
Sequences:
>Translated_158_residues MPRKPPSSPKSSPLQLGRAVAWPDSPEQAKLDRVPNPQKGTNYVARFTAPEFTALCPVTGQPDFAHLVIDYVPGSWLLES KSLKLYLASFRNHGAFHEDCTVAIGKRIVAAIKPKWLRIGGYWFPRGGIPIDVFWQTGAAPRGVWIPDQDVPSYRGRG >Mature_157_residues PRKPPSSPKSSPLQLGRAVAWPDSPEQAKLDRVPNPQKGTNYVARFTAPEFTALCPVTGQPDFAHLVIDYVPGSWLLESK SLKLYLASFRNHGAFHEDCTVAIGKRIVAAIKPKWLRIGGYWFPRGGIPIDVFWQTGAAPRGVWIPDQDVPSYRGRG
Specific function: Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
COG id: COG0780
COG function: function code R; Enzyme related to GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): QUEF_NITWN (Q3SRK3)
Other databases:
- EMBL: CP000115 - RefSeq: YP_318440.1 - ProteinModelPortal: Q3SRK3 - SMR: Q3SRK3 - STRING: Q3SRK3 - GeneID: 3675870 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_1828 - NMPDR: fig|323098.3.peg.1882 - eggNOG: COG0780 - HOGENOM: HBG294103 - OMA: HEDCTVA - ProtClustDB: PRK13258 - BioCyc: NWIN323098:NWI_1828-MONOMER - GO: GO:0005737 - HAMAP: MF_00818 - InterPro: IPR016856 - InterPro: IPR020602 - PIRSF: PIRSF027377 - TIGRFAMs: TIGR03139
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =1.7.1.13
Molecular weight: Translated: 17507; Mature: 17376
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRKPPSSPKSSPLQLGRAVAWPDSPEQAKLDRVPNPQKGTNYVARFTAPEFTALCPVTG CCCCCCCCCCCCHHHHCEEEECCCCCCCCHHCCCCCCCCCCCEEEEECCCCCEEECCCCC QPDFAHLVIDYVPGSWLLESKSLKLYLASFRNHGAFHEDCTVAIGKRIVAAIKPKWLRIG CCCEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEC GYWFPRGGIPIDVFWQTGAAPRGVWIPDQDVPSYRGRG CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PRKPPSSPKSSPLQLGRAVAWPDSPEQAKLDRVPNPQKGTNYVARFTAPEFTALCPVTG CCCCCCCCCCCHHHHCEEEECCCCCCCCHHCCCCCCCCCCCEEEEECCCCCEEECCCCC QPDFAHLVIDYVPGSWLLESKSLKLYLASFRNHGAFHEDCTVAIGKRIVAAIKPKWLRIG CCCEEEEEEEECCCCEEEECCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEEEC GYWFPRGGIPIDVFWQTGAAPRGVWIPDQDVPSYRGRG CEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA