| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75676017
Identifier: 75676017
GI number: 75676017
Start: 1999160
End: 1999732
Strand: Direct
Name: 75676017
Synonym: Nwi_1826
Alternate gene names: NA
Gene position: 1999160-1999732 (Clockwise)
Preceding gene: 75676016
Following gene: 75676019
Centisome position: 58.76
GC content: 68.59
Gene sequence:
>573_bases GTGGCACCGACCGGCGAGCGGCTACGCGGCGCCTACAAGGCCAGCGTGTTCTCCGGGCGCATCGAGGCAGGCTGGCGCGT CGAGACAGCATTGGCGGGCGTGACGCCCTATGCCGCAGCCCAGGCTATCAGCTATCGGCTGCCGTCCTATCTCGAACAGG GCAACGGCGCGATCGACAGCTTCGCGCTCGGCTATGTGGCGCGCAACGTCTCCGCGCCCCGGAGCGAACTGGGCCTGCGG CTCGATCGCACCACGGTGATGGCTGATGCGCTGCTGACGTGGCGCGGCCGCGCGGCGTGGGCGCGCAACTTCAACACAGC GCGTGATGTGGCGGCGACGTTCCAGTCGCTGCCGGGCACCGGATTCCTCGTCAGCGGCGCGGCGATGGCGCCCGATGCCG CGCTGGTGCCGCCGGAGCCGAAATCAACTGGCGCAACGGCTTCGCGCTTGCCGCGAACTTCGAGGGCGAGTTCTCCGACA ACTTATCCAGCTACGCCGGCAAGGGAACGCTGCGATACGCGTGGTGAGAAACTCCGCGCCGGCGTGTCCCCTCGATTCGA GAGCTGGCCATAA
Upstream 100 bases:
>100_bases CCTGTTCCAGGCCGGCGTGTTCTCCCGCCAGGCCCTGGGCTATGCAGGCTACCTGACCGGGGCCTTCGCCTACGGCTGAC ACAACGTTTCCACCGAGCGC
Downstream 100 bases:
>100_bases GCATGATCCGATCAAGTTGAATCGGACCATGCCGTGGAAATTATTGTTCGGGCGCATTTTCTTGCGGCGAACCGGTATCC ACTTCGCCGGAAAATACTCT
Product: outer membrane protein
Products: NA
Alternate protein names: Outer Membrane Protein; Serine Protease/Outer Membrane Autotransporter; Outer Membrane Autotransporter; Outer Membrane Autotransporter Domain-Containing Protein
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAPTGERLRGAYKASVFSGRIEAGWRVETALAGVTPYAAAQAISYRLPSYLEQGNGAIDSFALGYVARNVSAPRSELGLR LDRTTVMADALLTWRGRAAWARNFNTARDVAATFQSLPGTGFLVSGAAMAPDAALVPPEPKSTGATASRLPRTSRASSPT TYPATPARERCDTRGEKLRAGVSPRFESWP
Sequences:
>Translated_190_residues MAPTGERLRGAYKASVFSGRIEAGWRVETALAGVTPYAAAQAISYRLPSYLEQGNGAIDSFALGYVARNVSAPRSELGLR LDRTTVMADALLTWRGRAAWARNFNTARDVAATFQSLPGTGFLVSGAAMAPDAALVPPEPKSTGATASRLPRTSRASSPT TYPATPARERCDTRGEKLRAGVSPRFESWP >Mature_189_residues APTGERLRGAYKASVFSGRIEAGWRVETALAGVTPYAAAQAISYRLPSYLEQGNGAIDSFALGYVARNVSAPRSELGLRL DRTTVMADALLTWRGRAAWARNFNTARDVAATFQSLPGTGFLVSGAAMAPDAALVPPEPKSTGATASRLPRTSRASSPTT YPATPARERCDTRGEKLRAGVSPRFESWP
Specific function: Unknown
COG id: COG4625
COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20234; Mature: 20103
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPTGERLRGAYKASVFSGRIEAGWRVETALAGVTPYAAAQAISYRLPSYLEQGNGAIDS CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH FALGYVARNVSAPRSELGLRLDRTTVMADALLTWRGRAAWARNFNTARDVAATFQSLPGT HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCC GFLVSGAAMAPDAALVPPEPKSTGATASRLPRTSRASSPTTYPATPARERCDTRGEKLRA CEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GVSPRFESWP CCCCCCCCCC >Mature Secondary Structure APTGERLRGAYKASVFSGRIEAGWRVETALAGVTPYAAAQAISYRLPSYLEQGNGAIDS CCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH FALGYVARNVSAPRSELGLRLDRTTVMADALLTWRGRAAWARNFNTARDVAATFQSLPGT HHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCC GFLVSGAAMAPDAALVPPEPKSTGATASRLPRTSRASSPTTYPATPARERCDTRGEKLRA CEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GVSPRFESWP CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA