| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is panC
Identifier: 75675894
GI number: 75675894
Start: 1857059
End: 1857910
Strand: Direct
Name: panC
Synonym: Nwi_1702
Alternate gene names: 75675894
Gene position: 1857059-1857910 (Clockwise)
Preceding gene: 75675891
Following gene: 75675899
Centisome position: 54.59
GC content: 62.91
Gene sequence:
>852_bases ATGCCGCCCGCTCCCGCTATCGTTCGCACCCTGCCATCGCTACGCCGCGCCCTGGAGCGCCTGCGGGCGCGGCGAGGCAC CATCGCGCTGGTGCCGACCATGGGCGCACTTCACGAAGGACATCTGGCGCTGGTGCGTCAGGCAAAGAGGCGCGCATCGA GGGTTATCGTCTCGATTTTCGTCAACCCCACCCAGTTTGCGCCGCATGAAGACTTCGGATCCTACCCGCGAACCTGGAAG GCCGATCTGGCCAAACTCGCCGAGGCGAAGACCGACCTGATATGGCGTCCCGACGTCAGCACGATGTATCCGCGGGACTT CGCGACCCGGATATCGACTGAAGGACCGGCCATCGCGAGGCTTGAAGATCATTTCCGCCCGCACTTTTTCGGCGGCGTCA CGACCGTGGTCGGCAAGCTGTTCATCCAGTGCCGGCCTGATGTCGCATTGTTTGGCCAGAAGGATTATCAGCAACTCAAG GTCGTGACGCGAATGGTGGCCGATCTCGATCTCGGCGTGAAGATCGTTGGTGTCCCCATCGTGCGCGAACCCGACGGGCT CGCGATGTCGTCACGCAACGTCTACCTGTCGAACGAGCAGCGCGCTCGCGCGCCGACGCTTTATCGCACCCTGAAGGACG CGGCTGGGCGTTTGCGGAACGGGGATCATCTCGAAGCCGTCATGGCGGATGGCGCGAGGACGATCGAGGACACTGGCTTC TCGCTGGATTATTTCGAGGCCCGCCACGCCGAAACGCTGTCACCGGTCGGCTCGTTAAAGGATGGCCCGGTCAGGCTCCT GGTCGCAGCTAAGATCGGGGATACCCGCCTGATCGACAACCTCGGCGTTTAA
Upstream 100 bases:
>100_bases ACCGATTCAACAAGACGCGAAAATGCTTTAGTAAGGTGCGATCCGCTGCATCCCGCGCATGTAGCAGTCCCGTCCCTGGA ATTTATCCACCCGAGCAGCA
Downstream 100 bases:
>100_bases TTCACCCTCTTGCTCACTCGCTCCCGTTTCCAATTACAGCAACCCCAGATCGCGCAACTCGCGGCGCAGCGGCTCGGGCA TCTCTGCGACGCTCGCGGCG
Product: pantoate--beta-alanine ligase
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MPPAPAIVRTLPSLRRALERLRARRGTIALVPTMGALHEGHLALVRQAKRRASRVIVSIFVNPTQFAPHEDFGSYPRTWK ADLAKLAEAKTDLIWRPDVSTMYPRDFATRISTEGPAIARLEDHFRPHFFGGVTTVVGKLFIQCRPDVALFGQKDYQQLK VVTRMVADLDLGVKIVGVPIVREPDGLAMSSRNVYLSNEQRARAPTLYRTLKDAAGRLRNGDHLEAVMADGARTIEDTGF SLDYFEARHAETLSPVGSLKDGPVRLLVAAKIGDTRLIDNLGV
Sequences:
>Translated_283_residues MPPAPAIVRTLPSLRRALERLRARRGTIALVPTMGALHEGHLALVRQAKRRASRVIVSIFVNPTQFAPHEDFGSYPRTWK ADLAKLAEAKTDLIWRPDVSTMYPRDFATRISTEGPAIARLEDHFRPHFFGGVTTVVGKLFIQCRPDVALFGQKDYQQLK VVTRMVADLDLGVKIVGVPIVREPDGLAMSSRNVYLSNEQRARAPTLYRTLKDAAGRLRNGDHLEAVMADGARTIEDTGF SLDYFEARHAETLSPVGSLKDGPVRLLVAAKIGDTRLIDNLGV >Mature_282_residues PPAPAIVRTLPSLRRALERLRARRGTIALVPTMGALHEGHLALVRQAKRRASRVIVSIFVNPTQFAPHEDFGSYPRTWKA DLAKLAEAKTDLIWRPDVSTMYPRDFATRISTEGPAIARLEDHFRPHFFGGVTTVVGKLFIQCRPDVALFGQKDYQQLKV VTRMVADLDLGVKIVGVPIVREPDGLAMSSRNVYLSNEQRARAPTLYRTLKDAAGRLRNGDHLEAVMADGARTIEDTGFS LDYFEARHAETLSPVGSLKDGPVRLLVAAKIGDTRLIDNLGV
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
COG id: COG0414
COG function: function code H; Panthothenate synthetase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pantothenate synthetase family
Homologues:
Organism=Escherichia coli, GI1786325, Length=276, Percent_Identity=46.7391304347826, Blast_Score=240, Evalue=9e-65, Organism=Saccharomyces cerevisiae, GI6322046, Length=286, Percent_Identity=37.7622377622378, Blast_Score=181, Evalue=2e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PANC_NITWN (Q3SRX8)
Other databases:
- EMBL: CP000115 - RefSeq: YP_318315.1 - HSSP: P0A5R0 - ProteinModelPortal: Q3SRX8 - SMR: Q3SRX8 - STRING: Q3SRX8 - GeneID: 3675725 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_1702 - NMPDR: fig|323098.3.peg.1363 - eggNOG: COG0414 - HOGENOM: HBG428839 - OMA: EDFGSYP - PhylomeDB: Q3SRX8 - ProtClustDB: PRK00380 - BioCyc: NWIN323098:NWI_1702-MONOMER - GO: GO:0005737 - HAMAP: MF_00158 - InterPro: IPR004821 - InterPro: IPR003721 - InterPro: IPR014729 - Gene3D: G3DSA:3.40.50.620 - PANTHER: PTHR21299:SF1 - TIGRFAMs: TIGR00125 - TIGRFAMs: TIGR00018
Pfam domain/function: PF02569 Pantoate_ligase
EC number: =6.3.2.1
Molecular weight: Translated: 31341; Mature: 31209
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: ACT_SITE 41-41 BINDING 65-65 BINDING 65-65 BINDING 158-158 BINDING 181-181
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPAPAIVRTLPSLRRALERLRARRGTIALVPTMGALHEGHLALVRQAKRRASRVIVSIF CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEE VNPTQFAPHEDFGSYPRTWKADLAKLAEAKTDLIWRPDVSTMYPRDFATRISTEGPAIAR ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHCCCCCEEHH LEDHFRPHFFGGVTTVVGKLFIQCRPDVALFGQKDYQQLKVVTRMVADLDLGVKIVGVPI HHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEE VREPDGLAMSSRNVYLSNEQRARAPTLYRTLKDAAGRLRNGDHLEAVMADGARTIEDTGF EECCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCC SLDYFEARHAETLSPVGSLKDGPVRLLVAAKIGDTRLIDNLGV CCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHCCCC >Mature Secondary Structure PPAPAIVRTLPSLRRALERLRARRGTIALVPTMGALHEGHLALVRQAKRRASRVIVSIF CCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHEEEEEE VNPTQFAPHEDFGSYPRTWKADLAKLAEAKTDLIWRPDVSTMYPRDFATRISTEGPAIAR ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCCCCCHHHHHHHCCCCCEEHH LEDHFRPHFFGGVTTVVGKLFIQCRPDVALFGQKDYQQLKVVTRMVADLDLGVKIVGVPI HHHHCCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEEE VREPDGLAMSSRNVYLSNEQRARAPTLYRTLKDAAGRLRNGDHLEAVMADGARTIEDTGF EECCCCCEECCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHCCC SLDYFEARHAETLSPVGSLKDGPVRLLVAAKIGDTRLIDNLGV CCHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA