| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is bcp [H]
Identifier: 75675862
GI number: 75675862
Start: 1820445
End: 1821074
Strand: Direct
Name: bcp [H]
Synonym: Nwi_1670
Alternate gene names: 75675862
Gene position: 1820445-1821074 (Clockwise)
Preceding gene: 75675860
Following gene: 75675863
Centisome position: 53.51
GC content: 61.27
Gene sequence:
>630_bases ATGTCCAAGAAGATACGCAAGAAATCCTCGAAATCCGACAGTTCTGTAACGGTGCGGGCGGCAACTGTCGCTCACACGGA ACAGGCTCGCGAGGCCGGCCCGTCACCCTCCCCGGCAGCGACCACAAAAACCAAGCCGCGCCCTGCTCCGCCGGCCTCTC AAGGCGCCGGGCTCGCGGAAGGCTCCCCGGCCCCGCCATTCAACCTTCCCAGGGAAGACGGCGCCTTGGTTTCGCTTGCT GATTTCGCGGGAGGAAAGCTCGTAATCTTTTTCTATCCGCGCGCGGGAACGCCGGGCTGCACCATAGAGGCCATGGACTT CACCCGGCTGGCGACTGATTTCGCGGTCAGTGGAACGGCGGTGATCGGCGTATCGGCTGATCCGGTAAAGGCGCAGCTTT CGTTTCGAAACAAGCACCAGCTGTCCATTGCTCTGATATCGGATGAAAAGCACCAAATGCTGGAGGCTTATGGGGTCTGG GGTGAAAAGTCCATGTACGGCAAGACTTTCATGGGCGTTCTTCGCACAACCGTACTGGTGGATGGGGCCGGACGGATCGC TCGCATCTGGCGCAGGGTCAAGGTCGAAGGTCACGCGGACGAGGTGCTCGCGGCCGCGCGCGAACTGTGA
Upstream 100 bases:
>100_bases TCGCAGTCATGGCGGCGGCGGCAGTCTGACCGATTCGTCCTCGGCATCCGCGGCAATCATAACGGATAATGAGCGTTGGA AAACGACGAAAGGAAGGCGT
Downstream 100 bases:
>100_bases AGCTGGCTGGCCGTTTTCCGAAAATTAACCATGAACGGTTCCAATCAGCGTCGAAGTTGAGCCGCCTGGAACTTCGTTTT CGGTCGGCACAGGAGTGCCG
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSKKIRKKSSKSDSSVTVRAATVAHTEQAREAGPSPSPAATTKTKPRPAPPASQGAGLAEGSPAPPFNLPREDGALVSLA DFAGGKLVIFFYPRAGTPGCTIEAMDFTRLATDFAVSGTAVIGVSADPVKAQLSFRNKHQLSIALISDEKHQMLEAYGVW GEKSMYGKTFMGVLRTTVLVDGAGRIARIWRRVKVEGHADEVLAAAREL
Sequences:
>Translated_209_residues MSKKIRKKSSKSDSSVTVRAATVAHTEQAREAGPSPSPAATTKTKPRPAPPASQGAGLAEGSPAPPFNLPREDGALVSLA DFAGGKLVIFFYPRAGTPGCTIEAMDFTRLATDFAVSGTAVIGVSADPVKAQLSFRNKHQLSIALISDEKHQMLEAYGVW GEKSMYGKTFMGVLRTTVLVDGAGRIARIWRRVKVEGHADEVLAAAREL >Mature_208_residues SKKIRKKSSKSDSSVTVRAATVAHTEQAREAGPSPSPAATTKTKPRPAPPASQGAGLAEGSPAPPFNLPREDGALVSLAD FAGGKLVIFFYPRAGTPGCTIEAMDFTRLATDFAVSGTAVIGVSADPVKAQLSFRNKHQLSIALISDEKHQMLEAYGVWG EKSMYGKTFMGVLRTTVLVDGAGRIARIWRRVKVEGHADEVLAAAREL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=151, Percent_Identity=40.3973509933775, Blast_Score=133, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6322180, Length=157, Percent_Identity=34.3949044585987, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 22162; Mature: 22030
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKIRKKSSKSDSSVTVRAATVAHTEQAREAGPSPSPAATTKTKPRPAPPASQGAGLAE CCCCHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSPAPPFNLPREDGALVSLADFAGGKLVIFFYPRAGTPGCTIEAMDFTRLATDFAVSGTA CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHEECCEE VIGVSADPVKAQLSFRNKHQLSIALISDEKHQMLEAYGVWGEKSMYGKTFMGVLRTTVLV EEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE DGAGRIARIWRRVKVEGHADEVLAAAREL CCCCHHHHHHHHHCCCCCHHHHHHHHHCC >Mature Secondary Structure SKKIRKKSSKSDSSVTVRAATVAHTEQAREAGPSPSPAATTKTKPRPAPPASQGAGLAE CCCHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GSPAPPFNLPREDGALVSLADFAGGKLVIFFYPRAGTPGCTIEAMDFTRLATDFAVSGTA CCCCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCEEEECHHHHHHHHHEECCEE VIGVSADPVKAQLSFRNKHQLSIALISDEKHQMLEAYGVWGEKSMYGKTFMGVLRTTVLV EEEECCCCCEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEE DGAGRIARIWRRVKVEGHADEVLAAAREL CCCCHHHHHHHHHCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12704232 [H]