| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is purN [H]
Identifier: 75675790
GI number: 75675790
Start: 1747145
End: 1747798
Strand: Direct
Name: purN [H]
Synonym: Nwi_1598
Alternate gene names: 75675790
Gene position: 1747145-1747798 (Clockwise)
Preceding gene: 75675789
Following gene: 75675795
Centisome position: 51.36
GC content: 64.37
Gene sequence:
>654_bases ATGAAACGCCGTGTCGCCATCCTGATCTCCGGACGCGGATCGAACATGACGGCGCTGGTGGAGGCTGCAAAGGCCGAGGA CTTTCCGGCTGAAATAGCCGTCGTCATTTCCAATAAACCCGGCGCGGCGGGCCTCGCCAGAGCCCAGGCGGCCGGCGTCG AGACGCTCGTCATTGAAAGCAAGCCATTTGGCAAGGACCGTGCGGCGTTCGAGGCCGAACTGCAATCCGCTCTGGATGAC AGGCGCATCGAATTCATCTGCCTCGGCGGCTTCATGCGGCTGTTCACAGCCGAGTTCGTCCGAGGCTGGCATGGACGGAT GCTCAACATCCACCCCTCGCTGCTTCCATCATTCCGGGGCCTCGACCCCCACGGTCAGGCCCTGCGCGCGGGCGTGAAGA TCTCAGGCGCCACGGTGCATTTCGTCGTCGCGGAAACAGATGCCGGCCCCATTGTCATGCAGGGCGCAGTGGCTGTGCGT GACGACGACACGGCGGAGACGCTGGCCGCGCGCGTCCTGGACATCGAGCATCGCATCTACCCCGATGCGCTGCGGCTGGT CGCGGGCGGCGGCACGCGACTGGATGGCGACATTTGCAAGACGTCGGCAAACGCCAGTCCGGACGATAGCCTGATCTCGC CGTCCGTAATCTGA
Upstream 100 bases:
>100_bases GTTGCTGGGCGATGTGATCGTTGCAGGCGATGAAGGCCGGGTCGTTTACGACGGTCAACTCGATCTCGCCGTATAGAACG CCCCAGCAGGGAATGTGAGC
Downstream 100 bases:
>100_bases CCACGATTGATCTGACCACGATTGATCTGACCGCGTCCTGCTATAGCGTTTTCGAGCGAAGCGGATGACGTGACGGTTCG CGTGAAAAACGCGTCAGATC
Product: phosphoribosylglycinamide formyltransferase
Products: NA
Alternate protein names: 5'-phosphoribosylglycinamide transformylase; GAR transformylase; GART [H]
Number of amino acids: Translated: 217; Mature: 217
Protein sequence:
>217_residues MKRRVAILISGRGSNMTALVEAAKAEDFPAEIAVVISNKPGAAGLARAQAAGVETLVIESKPFGKDRAAFEAELQSALDD RRIEFICLGGFMRLFTAEFVRGWHGRMLNIHPSLLPSFRGLDPHGQALRAGVKISGATVHFVVAETDAGPIVMQGAVAVR DDDTAETLAARVLDIEHRIYPDALRLVAGGGTRLDGDICKTSANASPDDSLISPSVI
Sequences:
>Translated_217_residues MKRRVAILISGRGSNMTALVEAAKAEDFPAEIAVVISNKPGAAGLARAQAAGVETLVIESKPFGKDRAAFEAELQSALDD RRIEFICLGGFMRLFTAEFVRGWHGRMLNIHPSLLPSFRGLDPHGQALRAGVKISGATVHFVVAETDAGPIVMQGAVAVR DDDTAETLAARVLDIEHRIYPDALRLVAGGGTRLDGDICKTSANASPDDSLISPSVI >Mature_217_residues MKRRVAILISGRGSNMTALVEAAKAEDFPAEIAVVISNKPGAAGLARAQAAGVETLVIESKPFGKDRAAFEAELQSALDD RRIEFICLGGFMRLFTAEFVRGWHGRMLNIHPSLLPSFRGLDPHGQALRAGVKISGATVHFVVAETDAGPIVMQGAVAVR DDDTAETLAARVLDIEHRIYPDALRLVAGGGTRLDGDICKTSANASPDDSLISPSVI
Specific function: De novo purine biosynthesis; third step. [C]
COG id: COG0299
COG function: function code F; Folate-dependent phosphoribosylglycinamide formyltransferase PurN
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GART family [H]
Homologues:
Organism=Homo sapiens, GI4503915, Length=200, Percent_Identity=49, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI209869995, Length=200, Percent_Identity=49, Blast_Score=197, Evalue=8e-51, Organism=Homo sapiens, GI209869993, Length=200, Percent_Identity=49, Blast_Score=197, Evalue=8e-51, Organism=Escherichia coli, GI1788846, Length=191, Percent_Identity=39.7905759162304, Blast_Score=143, Evalue=1e-35, Organism=Escherichia coli, GI1787483, Length=186, Percent_Identity=32.7956989247312, Blast_Score=97, Evalue=1e-21, Organism=Caenorhabditis elegans, GI17567511, Length=185, Percent_Identity=43.2432432432432, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6320616, Length=201, Percent_Identity=30.3482587064677, Blast_Score=74, Evalue=2e-14, Organism=Drosophila melanogaster, GI24582400, Length=191, Percent_Identity=47.6439790575916, Blast_Score=175, Evalue=3e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002376 - InterPro: IPR001555 - InterPro: IPR004607 [H]
Pfam domain/function: PF00551 Formyl_trans_N [H]
EC number: =2.1.2.2 [H]
Molecular weight: Translated: 22999; Mature: 22999
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRVAILISGRGSNMTALVEAAKAEDFPAEIAVVISNKPGAAGLARAQAAGVETLVIES CCCEEEEEEECCCCCEEEEEEHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEEEC KPFGKDRAAFEAELQSALDDRRIEFICLGGFMRLFTAEFVRGWHGRMLNIHPSLLPSFRG CCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECHHHCCHHCC LDPHGQALRAGVKISGATVHFVVAETDAGPIVMQGAVAVRDDDTAETLAARVLDIEHRIY CCCCCHHHHCCEEECCCEEEEEEEECCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHCC PDALRLVAGGGTRLDGDICKTSANASPDDSLISPSVI CCHHHEEECCCCEECCHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRRVAILISGRGSNMTALVEAAKAEDFPAEIAVVISNKPGAAGLARAQAAGVETLVIES CCCEEEEEEECCCCCEEEEEEHHCCCCCCCEEEEEEECCCCCCHHHHHHHCCCEEEEEEC KPFGKDRAAFEAELQSALDDRRIEFICLGGFMRLFTAEFVRGWHGRMLNIHPSLLPSFRG CCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHCCCEEEECHHHCCHHCC LDPHGQALRAGVKISGATVHFVVAETDAGPIVMQGAVAVRDDDTAETLAARVLDIEHRIY CCCCCHHHHCCEEECCCEEEEEEEECCCCCEEEECEEEEECCCHHHHHHHHHHHHHHHCC PDALRLVAGGGTRLDGDICKTSANASPDDSLISPSVI CCHHHEEECCCCEECCHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3036807; 9384377 [H]