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The map label for this gene is ybgK [H]

Identifier: 75675694

GI number: 75675694

Start: 1630717

End: 1631736

Strand: Direct

Name: ybgK [H]

Synonym: Nwi_1502

Alternate gene names: 75675694

Gene position: 1630717-1631736 (Clockwise)

Preceding gene: 75675693

Following gene: 75675695

Centisome position: 47.93

GC content: 64.41

Gene sequence:

>1020_bases
ATGAGCAAACTTGTCGTCACCGCTGTCGGGCCCGTCACCTCGGTTCAGGACGGCGGCCGCTCCGGCGCGCAGCGTTACGG
GTTGCCGCCAGGCGGCGCGGCGGATCGACTCGCGCTGGCTGCCGGCAATTGTCTGGTCGGGAATCCCCCCTTTGCGGCTG
CGATTGAAATCGGCCCCTTCAGTACGAGCTTCACCGTTCGTGAAGGCAGGGTACGCGTTGCGCTCACGGGTGCCGCTCGG
AGTGCGGATGTTTCGGGCCGCCCGGTTTCGTTCAACGAATCCTGCACGTTCGGTGATGGCGACAGCCTGACACTCGGCGT
GGCGCGCGACGGCACCTTCAGCTACCTTGCGATCGAAGGCGGCGTGAAGGGCGAACCGATGTTCGGCAGCCTGGCCGTTC
TTGCACGCGCTGGTCTCGGCAGTCCGTTTCCCCGACCGTTACAGGCTGGCGACGTGCTCGATGTGGAGGCGGCGACCACC
GGGGCCGAACATGGGATCGAACTTCCCGGCCAGGACGACGGCCCGATCCGCATCGTGATGGGTCCGCAAGACGATGAGTT
CGGAGAGGCTACAGGACTGTTTCTCGGCAGCGAGTGGAAAATCTCGGCGACGAGCGATCGCATGGGCTATCGCCTCGAAG
GCCCGATCATCGAACACCTTCACGGCCATAACATCGTCTCCGATGGCACCGTGAACGGCAGCATTCAGATTCCCGGCAAC
GGACAACCGATCGTCCTGATGCCGGATCGCGGCACCAGCGGCGGCTATCCGAAGATCGCAACCGTCATGACGGCGGATCT
CGGTCGTTTCGCACAAATTCCCGTGGGCCGCGGTTTCCGCTTCAAGTCGGTTACCGTCGCCGAGGCGCAGGCTGAAGCGC
GCGCCATGGCCGACCTGTTGCGAACGCTGCCCGGCCGGGTGCGCGCGGTGCGCAATACCGACATTGACGATGCCTTGCGC
AACGCCAATATCGCCGGAACCGCGGTGAATGCATTCGATAGCGGGACGTGGCAGACATAG

Upstream 100 bases:

>100_bases
CCGGAGACGCCATCACGTTTTACGCCGTCGACGGCAAGCAGTTCGCGGAACAGGAGCGCGCCGCCGCGCACGGCGAGTGG
GTCGCGCAATTGGTGACGCC

Downstream 100 bases:

>100_bases
CGGGATGTGGCAGACTTGGCCGCCCCTGGAACCCTAAACGCCCCGCCGTATCGGACGAACCATGACGATCGATCTCAATT
GCGATCTTGGCGAAAGCTTC

Product: allophanate hydrolase subunit 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MSKLVVTAVGPVTSVQDGGRSGAQRYGLPPGGAADRLALAAGNCLVGNPPFAAAIEIGPFSTSFTVREGRVRVALTGAAR
SADVSGRPVSFNESCTFGDGDSLTLGVARDGTFSYLAIEGGVKGEPMFGSLAVLARAGLGSPFPRPLQAGDVLDVEAATT
GAEHGIELPGQDDGPIRIVMGPQDDEFGEATGLFLGSEWKISATSDRMGYRLEGPIIEHLHGHNIVSDGTVNGSIQIPGN
GQPIVLMPDRGTSGGYPKIATVMTADLGRFAQIPVGRGFRFKSVTVAEAQAEARAMADLLRTLPGRVRAVRNTDIDDALR
NANIAGTAVNAFDSGTWQT

Sequences:

>Translated_339_residues
MSKLVVTAVGPVTSVQDGGRSGAQRYGLPPGGAADRLALAAGNCLVGNPPFAAAIEIGPFSTSFTVREGRVRVALTGAAR
SADVSGRPVSFNESCTFGDGDSLTLGVARDGTFSYLAIEGGVKGEPMFGSLAVLARAGLGSPFPRPLQAGDVLDVEAATT
GAEHGIELPGQDDGPIRIVMGPQDDEFGEATGLFLGSEWKISATSDRMGYRLEGPIIEHLHGHNIVSDGTVNGSIQIPGN
GQPIVLMPDRGTSGGYPKIATVMTADLGRFAQIPVGRGFRFKSVTVAEAQAEARAMADLLRTLPGRVRAVRNTDIDDALR
NANIAGTAVNAFDSGTWQT
>Mature_338_residues
SKLVVTAVGPVTSVQDGGRSGAQRYGLPPGGAADRLALAAGNCLVGNPPFAAAIEIGPFSTSFTVREGRVRVALTGAARS
ADVSGRPVSFNESCTFGDGDSLTLGVARDGTFSYLAIEGGVKGEPMFGSLAVLARAGLGSPFPRPLQAGDVLDVEAATTG
AEHGIELPGQDDGPIRIVMGPQDDEFGEATGLFLGSEWKISATSDRMGYRLEGPIIEHLHGHNIVSDGTVNGSIQIPGNG
QPIVLMPDRGTSGGYPKIATVMTADLGRFAQIPVGRGFRFKSVTVAEAQAEARAMADLLRTLPGRVRAVRNTDIDDALRN
ANIAGTAVNAFDSGTWQT

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=293, Percent_Identity=37.2013651877133, Blast_Score=161, Evalue=5e-41,
Organism=Saccharomyces cerevisiae, GI6319685, Length=324, Percent_Identity=25.3086419753086, Blast_Score=83, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35046; Mature: 34915

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: PS00626 RCC1_2 ; PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKLVVTAVGPVTSVQDGGRSGAQRYGLPPGGAADRLALAAGNCLVGNPPFAAAIEIGPF
CCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCCEEEEEECCC
STSFTVREGRVRVALTGAARSADVSGRPVSFNESCTFGDGDSLTLGVARDGTFSYLAIEG
CCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC
GVKGEPMFGSLAVLARAGLGSPFPRPLQAGDVLDVEAATTGAEHGIELPGQDDGPIRIVM
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
GPQDDEFGEATGLFLGSEWKISATSDRMGYRLEGPIIEHLHGHNIVSDGTVNGSIQIPGN
CCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCHHHHHCCCCEECCCCCCCEEEECCC
GQPIVLMPDRGTSGGYPKIATVMTADLGRFAQIPVGRGFRFKSVTVAEAQAEARAMADLL
CCEEEEECCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEEEEEHHHHHHHHHHHHHH
RTLPGRVRAVRNTDIDDALRNANIAGTAVNAFDSGTWQT
HHCCCCEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCC
>Mature Secondary Structure 
SKLVVTAVGPVTSVQDGGRSGAQRYGLPPGGAADRLALAAGNCLVGNPPFAAAIEIGPF
CCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCEEECCCCCEEEEEECCC
STSFTVREGRVRVALTGAARSADVSGRPVSFNESCTFGDGDSLTLGVARDGTFSYLAIEG
CCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEC
GVKGEPMFGSLAVLARAGLGSPFPRPLQAGDVLDVEAATTGAEHGIELPGQDDGPIRIVM
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEE
GPQDDEFGEATGLFLGSEWKISATSDRMGYRLEGPIIEHLHGHNIVSDGTVNGSIQIPGN
CCCCCCCCCEEEEEECCCEEEEECCCCCCEEECCCHHHHHCCCCEECCCCCCCEEEECCC
GQPIVLMPDRGTSGGYPKIATVMTADLGRFAQIPVGRGFRFKSVTVAEAQAEARAMADLL
CCEEEEECCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEEEEEHHHHHHHHHHHHHH
RTLPGRVRAVRNTDIDDALRNANIAGTAVNAFDSGTWQT
HHCCCCEEEECCCCHHHHHHCCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]