| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675590
Identifier: 75675590
GI number: 75675590
Start: 1523263
End: 1524045
Strand: Direct
Name: 75675590
Synonym: Nwi_1398
Alternate gene names: NA
Gene position: 1523263-1524045 (Clockwise)
Preceding gene: 75675589
Following gene: 75675591
Centisome position: 44.77
GC content: 66.92
Gene sequence:
>783_bases ATGCGTGAATCAGATGAAGGCTCCGGCAAGGCGACGCCGGACCGGGAGGAAACGGCGCGCAGCTCCGCGCCGGCCGGGCC GCGCAAGCGCTTCTATGCCCGCGTGGGCGTCAACGAGACGCCGGAAGGATTCGCTATCCTGCTCGACGACAGGCCGGTTC GCACGCCGTCGCGTAACGTGCTGGCGGCGCCTGTACGCGAGATTGCCGAGACCATCGCAGCGGAATGGGACGCGCAACAT GACCTCATCAACCCCATGACCATGCCGCTGACGCGGCTCGCCAACAGCATCATCGATGGCGTGACCGTTCGCGTCGACGC CGTTGTCGAGGACATCGCCAAGTATCTCGAAACGGACCTCCTGTTCTATCGCGCCAGCCATCCCGATGCGCTGGTGGCCC GCGAAGCCACGCAATGGGACCCCGTGCTGCAATGGGCCGCTGAAGCGCTGGGAGCGCGGTTCATCCCGGCCGAGGGCATC GTGCATGTCCGTCAGCCGGATCAGGCCGTTACGGCCGTCCGCAAGGCACTGCCGACGGACCCTTGGGTGGTGGGGGCGCT GCATGTCGTGACGACGCTGACCGGCTCCGCGCTGCTTGCGATCGCTTTGATGCGCGGACGGCTGGATGCGGACGAAGTCT GGGCGGCTGCCTGCGTCGATGAGGATTGGAACAGCGAGCAATGGGGGGTCGATGAAGAGGCGGCCGTCCAGAGGGCGGTA CGCCTGGTCGATTTCCGGGCAGCGGCCACCGTCCTCCGGGCGCGGGTTGAACCAGCCGGTTAA
Upstream 100 bases:
>100_bases GGCGGAAAACCGCTACACACTTTTCCTCATCCCGCTCTAGGGGCTCAGCCGCTGTCGGCGAGCAAGATCGTCATAAGCAA GAGTGTCATAAGAGTGCGCC
Downstream 100 bases:
>100_bases GGAGAGGTTTAGATACCGAAGTTAGCCTGACGGGTGAAACGAGGCTTCATGGCGATCTCGATCAACCCGATTTTCCCGGT TATCGCGGCGCAGGACGCTG
Product: chaperone required for the assembly of F1-ATPase
Products: NA
Alternate protein names: ATP12 Chaperone Protein; Chaperone Protein; Chaperone; ATP12 Chaperone Family Protein; ATPase; ATP12 Atpase; ATP12 Chaperone Protein Family; Chaperone Required For Assembly Of F1-ATPase; ATP Synthase F1 Mitochondrial Assembly Chaperone ATP
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MRESDEGSGKATPDREETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNVLAAPVREIAETIAAEWDAQH DLINPMTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDLLFYRASHPDALVAREATQWDPVLQWAAEALGARFIPAEGI VHVRQPDQAVTAVRKALPTDPWVVGALHVVTTLTGSALLAIALMRGRLDADEVWAAACVDEDWNSEQWGVDEEAAVQRAV RLVDFRAAATVLRARVEPAG
Sequences:
>Translated_260_residues MRESDEGSGKATPDREETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNVLAAPVREIAETIAAEWDAQH DLINPMTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDLLFYRASHPDALVAREATQWDPVLQWAAEALGARFIPAEGI VHVRQPDQAVTAVRKALPTDPWVVGALHVVTTLTGSALLAIALMRGRLDADEVWAAACVDEDWNSEQWGVDEEAAVQRAV RLVDFRAAATVLRARVEPAG >Mature_260_residues MRESDEGSGKATPDREETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNVLAAPVREIAETIAAEWDAQH DLINPMTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDLLFYRASHPDALVAREATQWDPVLQWAAEALGARFIPAEGI VHVRQPDQAVTAVRKALPTDPWVVGALHVVTTLTGSALLAIALMRGRLDADEVWAAACVDEDWNSEQWGVDEEAAVQRAV RLVDFRAAATVLRARVEPAG
Specific function: Unknown
COG id: COG5387
COG function: function code O; Chaperone required for the assembly of the mitochondrial F1-ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21735485, Length=213, Percent_Identity=30.5164319248826, Blast_Score=121, Evalue=8e-28, Organism=Caenorhabditis elegans, GI71995783, Length=225, Percent_Identity=27.1111111111111, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24585626, Length=209, Percent_Identity=25.3588516746411, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28373; Mature: 28373
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRESDEGSGKATPDREETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNV CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCH LAAPVREIAETIAAEWDAQHDLINPMTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDL HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LFYRASHPDALVAREATQWDPVLQWAAEALGARFIPAEGIVHVRQPDQAVTAVRKALPTD HEEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCC PWVVGALHVVTTLTGSALLAIALMRGRLDADEVWAAACVDEDWNSEQWGVDEEAAVQRAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RLVDFRAAATVLRARVEPAG HHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRESDEGSGKATPDREETARSSAPAGPRKRFYARVGVNETPEGFAILLDDRPVRTPSRNV CCCCCCCCCCCCCCHHHHHHCCCCCCHHHHEEEECCCCCCCCCEEEEECCCCCCCCCCCH LAAPVREIAETIAAEWDAQHDLINPMTMPLTRLANSIIDGVTVRVDAVVEDIAKYLETDL HHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH LFYRASHPDALVAREATQWDPVLQWAAEALGARFIPAEGIVHVRQPDQAVTAVRKALPTD HEEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCC PWVVGALHVVTTLTGSALLAIALMRGRLDADEVWAAACVDEDWNSEQWGVDEEAAVQRAV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH RLVDFRAAATVLRARVEPAG HHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA