| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675589
Identifier: 75675589
GI number: 75675589
Start: 1522320
End: 1522685
Strand: Direct
Name: 75675589
Synonym: Nwi_1397
Alternate gene names: NA
Gene position: 1522320-1522685 (Clockwise)
Preceding gene: 75675588
Following gene: 75675590
Centisome position: 44.75
GC content: 60.93
Gene sequence:
>366_bases ATGGCACGTTTTGATCTGACGGATTTCGAATGGTCTGTGATCCAGCCGCTGTTGCCGAAAAAGTCGCGCGGCGTTGCACG GGTGGATGATCGGCGGGTGCTGAACGGGATTTTCTGGCGGCTGCGCACCGGTGCGCCGTGGGCGGACATTCCAGCGCGCT ACGGCCCGCACACCACTTGCGTGAACCGCTTCAACCGGTGGCGCAAGGCAGGCGTGTGGGATCGCATTCTGTCGGCTGTT TCAAAGGCTTACGATGGCGGCATCCAAATGATCGATTCGTCGTCGATCCGCGTGCATCAACATGCGGCCAACGGTCAAAA AAACAGACGCGATCCCGTTGCATGGGTCGCTCGCGCGGCGGGCTGA
Upstream 100 bases:
>100_bases GGTATCCACTTCGCCGGAAAATGCTCTAGGTCACGAACCCATAAACGGGATTCCGTTTGGACGGGATGCGTGATTCAATC TCCAGAGGTGGGAGGATTGA
Downstream 100 bases:
>100_bases CCACCAAAATCCACGCGCTGGTGGATGCCTGCGGCCTGCCGATCGTCCTCAAGATCACCGAAGGCCAGGCCCATGACGGG CGTAGCGCGCAGGACATGAT
Product: ISBm1, transposase orfA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MARFDLTDFEWSVIQPLLPKKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTCVNRFNRWRKAGVWDRILSAV SKAYDGGIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAAG
Sequences:
>Translated_121_residues MARFDLTDFEWSVIQPLLPKKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTCVNRFNRWRKAGVWDRILSAV SKAYDGGIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAAG >Mature_120_residues ARFDLTDFEWSVIQPLLPKKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTCVNRFNRWRKAGVWDRILSAVS KAYDGGIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To transposase of insertion sequence IS6501 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13783; Mature: 13652
Theoretical pI: Translated: 11.77; Mature: 11.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARFDLTDFEWSVIQPLLPKKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTC CCCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VNRFNRWRKAGVWDRILSAVSKAYDGGIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAA HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCC G C >Mature Secondary Structure ARFDLTDFEWSVIQPLLPKKSRGVARVDDRRVLNGIFWRLRTGAPWADIPARYGPHTTC CCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH VNRFNRWRKAGVWDRILSAVSKAYDGGIQMIDSSSIRVHQHAANGQKNRRDPVAWVARAA HHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424; 8190622 [H]