Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

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The map label for this gene is 75675383

Identifier: 75675383

GI number: 75675383

Start: 1295501

End: 1296892

Strand: Direct

Name: 75675383

Synonym: Nwi_1190

Alternate gene names: NA

Gene position: 1295501-1296892 (Clockwise)

Preceding gene: 75675382

Following gene: 75675384

Centisome position: 38.08

GC content: 65.09

Gene sequence:

>1392_bases
ATGGACCAGACCTCGATCGAACGGCTGAAGGACTACCTTGCGCAGCTTCCGCCGAAATCGCAGGCGTTGTTGATGCGGGA
GTTCGAGCGCGCGGTGGAGCGCGGCGAAGACGCTGCGGTCGCGAACCTCGTTCTCGGGGAGCTGCGCCGGATTGACCCCC
AATCGGGTGACAGCGAGCAGCGGAGTGAAGACCCGGTCCGGCATCTGTTCCGTCCCCTCGATCCGTTTCTCGTGGAAGAC
AATGTCGTGCCGCGCTCCGGCCAGATCCGGCGCAACTCGCTCGTGCCGGTCTGGCGTTGGCTGGCGCGCGAGGGCGCGCC
GGATGACGCGCGCGCGTTCGAGGCCGTGCTGGCGGCTGAGGCCGGATCGGCATCCGGGATCGAGACGGCGGCACGGGTTT
TCCAGCCGGTGGCGGCAGCCGCCATCCTGCGAATCCTTACGGATAGTTCCGGCATCAACCGCCAGCGGACGCTTGGCCGC
ATCAGCGCTCCCGGCGTCATTGAAGATCTGCCCGCGATCGCGGCGGTTCTGCACGCGCGCGAAGCCCTCGACACCCTGAA
TATTCGGCTGCCTGGTTTTCTGCCTGTCTTCGGCGAGCCGCAGATCGCCTCCCTGATGACGGCGCTCAATGTTCCTTCCC
TGCAAACGCCGGCGGCCTTGCCGTTTGCGTTGTCGCTGGTGATGCAGCGCCTGTCGGCACCGTGGCAGATCATCCGCCTC
GCGGTTCAGGTCGCGGGGTCGGACGATGAGATACGCGTGGCGGCGACGCCTTATGGCGTGGCCGTCAAGATGGCGCTCGA
CGATCTGTCGCAGACGTCGGCCGTTCTGCGGGCCGATATCCGGCGCGGCCGGTTCGAGAATGTCTCCCGGCACTTGAAGA
CCTTGCACGACGGTGTTCGCGGGCTAAGGACCGAGCTTGATATCCGAACCGATTCCGGCTGGGGGCGTCAGCTCGCGGCG
ATCAGGGTCGATATTTCCGAGGTTCTGCAATCGGAGATCGAAGGCGTCGCCGGCCGTGTGCGGCGTATTTTGCGTCAGCG
GCCCGACAAGGACATTCCAGCCGGCGCAAAACTCGACTCGATCGAGGTCGAGGAAACCGCCGCGTTGATCGATTTTGTCG
CGGTATGCCGGACCTACGCCAGCGAACTGGCCATCAACGAAGTCACGACGCGCACCTATTCGGACTTGCAGCATTACGTC
GAGAGGACCTCCGAAACCCTTGTCGAAGCGCTTCGCAACGGCGATGAGCGCGTGCGGGCGTTCCGGCAGCAGCAGGTCAA
GGCGGTGATCCGTTTTTGCGAGGTTCTGTTCGGCCGGGATTACTCGTCGCTGATGAGCCGGGCGGCGGACCACGCGCTCA
CGGCCGAACGCAAATCGTCGCGGGCAGGGTGA

Upstream 100 bases:

>100_bases
TCCTCCGGCCCGGCGCAACGCATCCTTAAGACCGCGTCTGATATGAGGCGCTACGGGCTTTCCGGTGTCCGCGCGATCGT
TCGCGTGAAGATGTGCGTGC

Downstream 100 bases:

>100_bases
GCGGGCGTCCGTGTTTCCGATAAACGCTATTAAATCATGCGGTTGTGGATGTTTACCGTCAATTGTGCCGCAATTGTCAA
TTGCGTCCGTATTCCAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED
NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR
ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL
AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA
IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV
ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG

Sequences:

>Translated_463_residues
MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED
NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR
ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL
AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA
IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV
ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG
>Mature_463_residues
MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQRSEDPVRHLFRPLDPFLVED
NVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAEAGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGR
ISAPGVIEDLPAIAAVLHAREALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL
AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVRGLRTELDIRTDSGWGRQLAA
IRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDSIEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYV
ERTSETLVEALRNGDERVRAFRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51082; Mature: 51082

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQ
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHH
RSEDPVRHLFRPLDPFLVEDNVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAE
HCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
AGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGRISAPGVIEDLPAIAAVLHAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
EALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL
HHHHHHCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVR
HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GLRTELDIRTDSGWGRQLAAIRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDS
HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYVERTSETLVEALRNGDERVRA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDQTSIERLKDYLAQLPPKSQALLMREFERAVERGEDAAVANLVLGELRRIDPQSGDSEQ
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHH
RSEDPVRHLFRPLDPFLVEDNVVPRSGQIRRNSLVPVWRWLAREGAPDDARAFEAVLAAE
HCCCHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHC
AGSASGIETAARVFQPVAAAAILRILTDSSGINRQRTLGRISAPGVIEDLPAIAAVLHAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHH
EALDTLNIRLPGFLPVFGEPQIASLMTALNVPSLQTPAALPFALSLVMQRLSAPWQIIRL
HHHHHHCEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHH
AVQVAGSDDEIRVAATPYGVAVKMALDDLSQTSAVLRADIRRGRFENVSRHLKTLHDGVR
HHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
GLRTELDIRTDSGWGRQLAAIRVDISEVLQSEIEGVAGRVRRILRQRPDKDIPAGAKLDS
HHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
IEVEETAALIDFVAVCRTYASELAINEVTTRTYSDLQHYVERTSETLVEALRNGDERVRA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FRQQQVKAVIRFCEVLFGRDYSSLMSRAADHALTAERKSSRAG
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA