| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is fliE [H]
Identifier: 75675327
GI number: 75675327
Start: 1245405
End: 1245716
Strand: Direct
Name: fliE [H]
Synonym: Nwi_1134
Alternate gene names: 75675327
Gene position: 1245405-1245716 (Clockwise)
Preceding gene: 75675326
Following gene: 75675328
Centisome position: 36.61
GC content: 66.03
Gene sequence:
>312_bases ATGGCATCGCCAACAGTCGCAGCAAACGCCTATGCAAGCCTCGCGAGGATGATGGATTCTGGCGCCGTCGCCGGCAAGGC GCCGGGTGGCGATGGTCCCTCGTTCGGGGCGGTGCTGAAGGATGTGCTCGGCGGCGTGGTGGAAGCGGGGCGCGCGTCCG ACGCGCAGACCGTGGCGATGGCGTCGGGCAAGGCCAACCTGATGGACGTCGTGACAGCGGTCGCCGATACCGACGTCGCG GTGTCGACGCTGGTCTCGGTGCGCGACCGCGTCATCCAATCCTATGAAGACATCATGAGGATGCCGATCTGA
Upstream 100 bases:
>100_bases GCAGCGGTCCTACGAGGCGAACCTCAACATCATCAGCGCGACACGCCGGATGATCCAGCGCACACTCGACATCCTCAAGT CCTGATCGGAGAATCTGGCC
Downstream 100 bases:
>100_bases TTGAGACTCCTCATGTCGAACCTTGAAGCCCTGCTTTACCTATCTCCGCGCGGGGAGCAGGTGCGCGCGCTGCTATTGCA TCATTCCTGATCTGATCGAA
Product: flagellar hook-basal body protein FliE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MASPTVAANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAMASGKANLMDVVTAVADTDVA VSTLVSVRDRVIQSYEDIMRMPI
Sequences:
>Translated_103_residues MASPTVAANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAMASGKANLMDVVTAVADTDVA VSTLVSVRDRVIQSYEDIMRMPI >Mature_102_residues ASPTVAANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAMASGKANLMDVVTAVADTDVAV STLVSVRDRVIQSYEDIMRMPI
Specific function: Unknown
COG id: COG1677
COG function: function code NU; Flagellar hook-basal body protein
Gene ontology:
Cell location: Bacterial flagellum basal body (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliE family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001624 [H]
Pfam domain/function: PF02049 FliE [H]
EC number: NA
Molecular weight: Translated: 10345; Mature: 10214
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPTVAANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAM CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH ASGKANLMDVVTAVADTDVAVSTLVSVRDRVIQSYEDIMRMPI HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASPTVAANAYASLARMMDSGAVAGKAPGGDGPSFGAVLKDVLGGVVEAGRASDAQTVAM CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH ASGKANLMDVVTAVADTDVAVSTLVSVRDRVIQSYEDIMRMPI HCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]