Click here to switch to the map view.

The map label for this gene is flgC [H]

Identifier: 75675326

GI number: 75675326

Start: 1244964

End: 1245389

Strand: Direct

Name: flgC [H]

Synonym: Nwi_1133

Alternate gene names: 75675326

Gene position: 1244964-1245389 (Clockwise)

Preceding gene: 75675325

Following gene: 75675327

Centisome position: 36.59

GC content: 63.85

Gene sequence:

>426_bases
ATGGCAGACAACGGCGCCGACTTCATGCGATCGATGAGCATCGCGACGTCCGGCCTGCGAGCGCAGGCGGGAAGGATGCG
GGTGATCTCGGAAAACATCGCCAACGCCAACTCAACCGCGCAGGCGCCGGGCGGCGATCCGTACCGTCGCAAGGTGCCGA
CCTTTTCCTCCGCTCTCGATCGTGCGCTCGATGCGAAAGTGGTGACGCTCGGCCGGGTGAGGCCTGACACGTCGACGTTC
CGCATCAAGCACGAGCCGGGTAATCCGGCCGCGGACACCAGCGGCAACGTCAAGTATCCGAACGTCAATCCGCTGGTGGA
GATGACCGACATGCGCGACGCGCAGCGGTCCTACGAGGCGAACCTCAACATCATCAGCGCGACACGCCGGATGATCCAGC
GCACACTCGACATCCTCAAGTCCTGA

Upstream 100 bases:

>100_bases
ACTACGCCGCCGCGGCCTCGCTTTACAGCCGGAGCCTGCGGCTTCTGAAGATGGCCGCCGGCAAGGCGTGACGCACGGTT
GAACGGGAGGATATCGCATC

Downstream 100 bases:

>100_bases
TCGGAGAATCTGGCCATGGCATCGCCAACAGTCGCAGCAAACGCCTATGCAAGCCTCGCGAGGATGATGGATTCTGGCGC
CGTCGCCGGCAAGGCGCCGG

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MADNGADFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKVVTLGRVRPDTSTF
RIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS

Sequences:

>Translated_141_residues
MADNGADFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKVVTLGRVRPDTSTF
RIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS
>Mature_140_residues
ADNGADFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALDRALDAKVVTLGRVRPDTSTFR
IKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEANLNIISATRRMIQRTLDILKS

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=131, Percent_Identity=35.1145038167939, Blast_Score=81, Evalue=3e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 15411; Mature: 15279

Theoretical pI: Translated: 10.74; Mature: 10.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADNGADFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALD
CCCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH
RALDAKVVTLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEA
HHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEHHHHHHHHHHHHC
NLNIISATRRMIQRTLDILKS
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADNGADFMRSMSIATSGLRAQAGRMRVISENIANANSTAQAPGGDPYRRKVPTFSSALD
CCCHHHHHHHHHHHHHCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCHHHCCCCHHHHHH
RALDAKVVTLGRVRPDTSTFRIKHEPGNPAADTSGNVKYPNVNPLVEMTDMRDAQRSYEA
HHHCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCEEHHHHHHHHHHHHC
NLNIISATRRMIQRTLDILKS
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]