| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is 75675073
Identifier: 75675073
GI number: 75675073
Start: 953933
End: 954487
Strand: Direct
Name: 75675073
Synonym: Nwi_0878
Alternate gene names: NA
Gene position: 953933-954487 (Clockwise)
Preceding gene: 75675067
Following gene: 75675074
Centisome position: 28.04
GC content: 58.38
Gene sequence:
>555_bases ATGGCGACGACGGTCACCCAAGTCACTTTCGATACGCCTGCGCCGGAGTTTCGGCTTCCGGCGACCGACGGCAAGACTTA TGGACTGGACGATCTTGCCGGCGTAAATGGTACCGTCGTTGTCTTTATCTGCAACCATTGCCCCTACGTCAAAGCGGTGA TCGACCGCATGGTTGCGGACGCGCGGGTGCTCATGTCGGAGGACATTGGTTTTGTGGCGATTTGTTCGAACGATGCGGCG AGTCACCCCGAAGATTCATTTGAAAATATGAAGAAATTCGCCGAGACTCACGGCTTTCCGTTTCCTTATCTGCACGATGA GACCCAAGAAGTCGCGCGCGCGTATGGGGCGGTGTGTACGCCGGACTTCTTCGGTTACAGCGCCGACCGTAAGCTCAAGT ACCGCGGTCGGCTCGACGAAGGCCGCAAAACTCCGCCCCGCGCGGAGGCACCCCGAGAGCTTGTCGAAGCCATGCGCGCT ATTGCGCGGACCGGTGTGGCGCCGGCTGATCAAAACCCGTCCCTTGGCTGCTCGATTAAATGGAAGGATTCCTGA
Upstream 100 bases:
>100_bases CTCCTTGAGAGACCCAGGCTCCCCGTTTGCCGCCGAAAAGGAGCCGAACTTTGAAACCGGATTACATGTATTCTTTACTT TCGTCACAAGGAGATGCGAG
Downstream 100 bases:
>100_bases AACCGGTCCCCTCACCATAAGCCGCACCAGCTCCGCGGTCGAAGTCATGGCTTCTCCGAAAATACTTCGAGCCCTTTTGG CTACAGCACTCCGTCCGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Redoxin Domain Protein; Thioredoxin Family Protein; Redoxin; Redoxin Superfamily; Thiol-Disulfide Isomerase/Thioredoxin; Thioredoxin; Peroxiredoxin; Thiol-Disulfide Isomerase; Thiol-Disulfide Isomerase Or Thioredoxin; Antioxidant AhpC/TSA Family; Alkyl Hydroperoxide Reductase; Thioredoxin Domain-Containing Protein; Anti-Oxidant AhpCTSA Family Protein; Thiol-Disulfide Isomerase Thioredoxin Family; Peroxiredoxin-Like Protein; Thiol-Disulfide Isomerase And Thioredoxin; AhpC/TSA Family Protein; Thiol-Disulfide Isomerase-Like Protein; Thiol-Disulfide Isomerase And Thioredoxins
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MATTVTQVTFDTPAPEFRLPATDGKTYGLDDLAGVNGTVVVFICNHCPYVKAVIDRMVADARVLMSEDIGFVAICSNDAA SHPEDSFENMKKFAETHGFPFPYLHDETQEVARAYGAVCTPDFFGYSADRKLKYRGRLDEGRKTPPRAEAPRELVEAMRA IARTGVAPADQNPSLGCSIKWKDS
Sequences:
>Translated_184_residues MATTVTQVTFDTPAPEFRLPATDGKTYGLDDLAGVNGTVVVFICNHCPYVKAVIDRMVADARVLMSEDIGFVAICSNDAA SHPEDSFENMKKFAETHGFPFPYLHDETQEVARAYGAVCTPDFFGYSADRKLKYRGRLDEGRKTPPRAEAPRELVEAMRA IARTGVAPADQNPSLGCSIKWKDS >Mature_183_residues ATTVTQVTFDTPAPEFRLPATDGKTYGLDDLAGVNGTVVVFICNHCPYVKAVIDRMVADARVLMSEDIGFVAICSNDAAS HPEDSFENMKKFAETHGFPFPYLHDETQEVARAYGAVCTPDFFGYSADRKLKYRGRLDEGRKTPPRAEAPRELVEAMRAI ARTGVAPADQNPSLGCSIKWKDS
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20211; Mature: 20080
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTVTQVTFDTPAPEFRLPATDGKTYGLDDLAGVNGTVVVFICNHCPYVKAVIDRMVAD CCCEEEEEEECCCCCCEECCCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH ARVLMSEDIGFVAICSNDAASHPEDSFENMKKFAETHGFPFPYLHDETQEVARAYGAVCT HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC PDFFGYSADRKLKYRGRLDEGRKTPPRAEAPRELVEAMRAIARTGVAPADQNPSLGCSIK CHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE WKDS ECCC >Mature Secondary Structure ATTVTQVTFDTPAPEFRLPATDGKTYGLDDLAGVNGTVVVFICNHCPYVKAVIDRMVAD CCEEEEEEECCCCCCEECCCCCCCCCCCHHHCCCCCEEEEEEECCCCHHHHHHHHHHHH ARVLMSEDIGFVAICSNDAASHPEDSFENMKKFAETHGFPFPYLHDETQEVARAYGAVCT HHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCC PDFFGYSADRKLKYRGRLDEGRKTPPRAEAPRELVEAMRAIARTGVAPADQNPSLGCSIK CHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE WKDS ECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA