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The map label for this gene is exbD [H]

Identifier: 75674901

GI number: 75674901

Start: 786995

End: 787465

Strand: Direct

Name: exbD [H]

Synonym: Nwi_0704

Alternate gene names: 75674901

Gene position: 786995-787465 (Clockwise)

Preceding gene: 75674900

Following gene: 75674902

Centisome position: 23.13

GC content: 66.88

Gene sequence:

>471_bases
ATGGGGGTATCGCTGAAGAACCCGCAGGATGGCGGCATCGACGAGCTGAGCGAGATCAACGTCACGCCGTTCATCGACGT
GATGCTGGTGCTTTTGATCATCTTCATGGTGGCGGCGCCGCTGTCGACGGTGGATGTCGCGGTCGACCTGCCGGTGTCGA
ACGCGCAGCCGCAACCGCGTCCCGACAAGCCGGTGTTCCTGACGGTGAAGCAGGACCTGACGCTGGCGCTCGGCAATGAC
GACGTGCCGCGCAACACGCTGCAGGCGACGCTGGACCAGCAGACCGAGAATGACCGCGAGCAGCGGGTGTTCCTGCGCGC
CGACGGGACGGTGGCCTATACCGAGCTGATGAAGGTGATGAACCTGCTGCGCGAGGCCGGCTATCTCAAGATCGCGCTGG
TGGGGCTTGAGGATACCGGGCAGGCGGTGGCGGCGGGCGGAGCCGCGCCGGCGGCGGCGCCTGCGCCATGA

Upstream 100 bases:

>100_bases
CATTCAGCACATCTCGCGCGATCTGGAGCGGCAGGAGCGGGGGCTCGGCCCGTCCGTGGTGGCGCTGTCGCGCGGCCGCG
CTGCGGCTGAGTGATGCGCC

Downstream 100 bases:

>100_bases
TGAAAATCGACTGGCGCGACCCGGACGGCCGGGCCGGCGATGATGTGAACCGGGCGGCGGCGCTGCGCTGGACCGCGGCC
GGGCTTGCGGTGGTGGCGCT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGVSLKNPQDGGIDELSEINVTPFIDVMLVLLIIFMVAAPLSTVDVAVDLPVSNAQPQPRPDKPVFLTVKQDLTLALGND
DVPRNTLQATLDQQTENDREQRVFLRADGTVAYTELMKVMNLLREAGYLKIALVGLEDTGQAVAAGGAAPAAAPAP

Sequences:

>Translated_156_residues
MGVSLKNPQDGGIDELSEINVTPFIDVMLVLLIIFMVAAPLSTVDVAVDLPVSNAQPQPRPDKPVFLTVKQDLTLALGND
DVPRNTLQATLDQQTENDREQRVFLRADGTVAYTELMKVMNLLREAGYLKIALVGLEDTGQAVAAGGAAPAAAPAP
>Mature_155_residues
GVSLKNPQDGGIDELSEINVTPFIDVMLVLLIIFMVAAPLSTVDVAVDLPVSNAQPQPRPDKPVFLTVKQDLTLALGNDD
VPRNTLQATLDQQTENDREQRVFLRADGTVAYTELMKVMNLLREAGYLKIALVGLEDTGQAVAAGGAAPAAAPAP

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=137, Percent_Identity=58.3941605839416, Blast_Score=154, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003400
- InterPro:   IPR014170 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 16592; Mature: 16461

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVSLKNPQDGGIDELSEINVTPFIDVMLVLLIIFMVAAPLSTVDVAVDLPVSNAQPQPR
CCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
PDKPVFLTVKQDLTLALGNDDVPRNTLQATLDQQTENDREQRVFLRADGTVAYTELMKVM
CCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHH
NLLREAGYLKIALVGLEDTGQAVAAGGAAPAAAPAP
HHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
GVSLKNPQDGGIDELSEINVTPFIDVMLVLLIIFMVAAPLSTVDVAVDLPVSNAQPQPR
CCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCC
PDKPVFLTVKQDLTLALGNDDVPRNTLQATLDQQTENDREQRVFLRADGTVAYTELMKVM
CCCCEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCCCCHHEEEEEECCCCHHHHHHHHH
NLLREAGYLKIALVGLEDTGQAVAAGGAAPAAAPAP
HHHHHCCCEEEEEEECCCCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]