| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is yhhW [C]
Identifier: 75674814
GI number: 75674814
Start: 695774
End: 696655
Strand: Direct
Name: yhhW [C]
Synonym: Nwi_0616
Alternate gene names: 75674814
Gene position: 695774-696655 (Clockwise)
Preceding gene: 75674811
Following gene: 75674816
Centisome position: 20.45
GC content: 65.87
Gene sequence:
>882_bases ATGAGAAAGGTTCTCGGTGTTTTCAGCGGCCCCCGGCAGCATTGGGTCGGCGATGGCTTTCCGGTCCGCTCGCTGTTTTC GCACGCCAGCCACGGCGACCATGTCAGCCCGTTTCTGCTGCTGGATTATGCCGGCCCCGCCGATTTCACCCCGGCGGAGC GACCGCGCGGCGTCGGCGTCCATCCGCATCGCGGTTTCGAGACCGTCACCATCGTCTATCAGGGCGAGGTCGAGCACCGC GATTCCACCGGCAACGGTGGGCTGATCGGGCCTGGGGACGTGCAATGGATGACGGCCGCCTCGGGCATCCTGCACGAGGA GTTCCACTCCCGCGCCTTCACGAAGAAGGGCGGCGCGCTGGAGATGGTGCAGCTCTGGGTCAACCTGCCGGCCAGGGACA AGAACGCGGAGCCTGGCTATCAGACCTTGCTCAACGCGGATATTCCCTCGGTCGACCTGCCGGACGGCGCGGGCCGGTTG CGGGTGATCGCGGGAGAGTTCGACGGCCGCAAGGGGCCTGCGAAAACCTTCACGCCGGTCGGTATCTACGACGTGAAGCT CAATCGCGACGGCGTTGCGACGCTTAACCCGCCGGAGGGGCACACCGTTGCGGTGGTGGTGCTGAAGGGCACCGTACTGG TTGGCGGCAGCGAGATTGCCCGCGAGGCGCAGTTCGCGCTGCTCGACCGCAATGGCGGCGAGGTGACCATCGAGGCCAAT GGTGATGCCTTGGTGCTGATCCTGTCCGGCGTACCGATCGACGAGCCGGTGGTGATGCGCGGTCCCTTCGTCATGAATAC GGAGGGTGAGATCCGCCAGGCCATGATCGATTTCCAGAGCGGCCGTTTCGGCACTCTGGAGCCGGTCGGGGCTGGTGCCT GA
Upstream 100 bases:
>100_bases ACGTTGAGGCGCGATATTGCCAGCTAGCGGGTTCTTTGTCTCGCTCATATTGTTGATGCCAAGACGGCGGCCGATCCGGC TGCGTTACGGAGTGACGATC
Downstream 100 bases:
>100_bases CCAACAACGCTCGCGGGAGGCGGTACGCCGCTTCCCGCTTTTCTTTTGTCTTTTTTCTTTCGTCTTTTTGAATCCGTTTA GCCTGAAGAAAATGCTCTCG
Product: pirin
Products: NA
Alternate protein names: Putative quercetinase; Pirin-like protein PA2418 [H]
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA
Sequences:
>Translated_293_residues MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA >Mature_293_residues MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGVHPHRGFETVTIVYQGEVEHR DSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGALEMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRL RVIAGEFDGRKGPAKTFTPVGIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA
Specific function: Putative quercetin 2,3-dioxygenase [H]
COG id: COG1741
COG function: function code R; Pirin-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pirin family [H]
Homologues:
Organism=Homo sapiens, GI66363697, Length=257, Percent_Identity=37.3540856031128, Blast_Score=139, Evalue=3e-33, Organism=Homo sapiens, GI4505823, Length=257, Percent_Identity=37.3540856031128, Blast_Score=139, Evalue=3e-33, Organism=Escherichia coli, GI1789847, Length=238, Percent_Identity=26.0504201680672, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011051 - InterPro: IPR012093 - InterPro: IPR008778 - InterPro: IPR003829 - InterPro: IPR014710 [H]
Pfam domain/function: PF02678 Pirin; PF05726 Pirin_C [H]
EC number: =1.13.11.24 [H]
Molecular weight: Translated: 31257; Mature: 31257
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGV CCCEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTIVYQGEVEHRDSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGAL CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCE EMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRLRVIAGEFDGRKGPAKTFTPV EEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC GIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN EEEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCHHHHHCEEEEEEECCCCEEEEEEC GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA CCEEEEEEECCCCCCCEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRKVLGVFSGPRQHWVGDGFPVRSLFSHASHGDHVSPFLLLDYAGPADFTPAERPRGVGV CCCEEECCCCCHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC HPHRGFETVTIVYQGEVEHRDSTGNGGLIGPGDVQWMTAASGILHEEFHSRAFTKKGGAL CCCCCCEEEEEEEECCCCCCCCCCCCCEECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCE EMVQLWVNLPARDKNAEPGYQTLLNADIPSVDLPDGAGRLRVIAGEFDGRKGPAKTFTPV EEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCC GIYDVKLNRDGVATLNPPEGHTVAVVVLKGTVLVGGSEIAREAQFALLDRNGGEVTIEAN EEEEEEECCCCEEEECCCCCCEEEEEEEEEEEEECCHHHHHCEEEEEEECCCCEEEEEEC GDALVLILSGVPIDEPVVMRGPFVMNTEGEIRQAMIDFQSGRFGTLEPVGAGA CCEEEEEEECCCCCCCEEEECCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]