| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is kdpE [H]
Identifier: 75674720
GI number: 75674720
Start: 580376
End: 580741
Strand: Direct
Name: kdpE [H]
Synonym: Nwi_0522
Alternate gene names: 75674720
Gene position: 580376-580741 (Clockwise)
Preceding gene: 75674719
Following gene: 75674721
Centisome position: 17.06
GC content: 57.1
Gene sequence:
>366_bases ATGAAAACCTGTCTGGTCGTCGATGATTCGAGTGTCATTCGCAAGGTTGCGCGACGCATCCTGGAAGGCTTCAATTTTCG CATCGTCGAGGCCGAAAATGGAGAGAAGGGACTGGAGGCGTGCAGGCTTGAACTGCCTGACGCCGTGCTTCTGGACTGGA ATATGCCCGTTATGGACGGCTACGAATTTCTTCGCAACCTGCGCCGGATGCCCGGTGGCGATCAGCCGAAGGTGGTGTTC TGCACCACGGAGAACGACGTGGCGCACATCGCCCGCGCGCTCCACGCTGGCGCCAACGAATACATCATGAAGCCGTTCGA CAAGGACATCGTCACGGCGAAATTTCAGGAAATCGGCCTGATCTGA
Upstream 100 bases:
>100_bases ATCGTGTTTTGGAGATTGCACCGGACAAGCTTGCGGCATGACCACGGCGGCGCAGGCGCGCCGGCCGAGGAAAAAGCGTT GAGAAGACACGGAGACCAAA
Downstream 100 bases:
>100_bases ATCTCGTCGCGATCCGGCCGGATATTTTTCATCTTGCGCGTAATGGGCATGAGTACTGCGGTGGCAAGTCCGGTGGCTCT GGATTCGGGAAAGCTGGAGC
Product: CheY protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKTCLVVDDSSVIRKVARRILEGFNFRIVEAENGEKGLEACRLELPDAVLLDWNMPVMDGYEFLRNLRRMPGGDQPKVVF CTTENDVAHIARALHAGANEYIMKPFDKDIVTAKFQEIGLI
Sequences:
>Translated_121_residues MKTCLVVDDSSVIRKVARRILEGFNFRIVEAENGEKGLEACRLELPDAVLLDWNMPVMDGYEFLRNLRRMPGGDQPKVVF CTTENDVAHIARALHAGANEYIMKPFDKDIVTAKFQEIGLI >Mature_121_residues MKTCLVVDDSSVIRKVARRILEGFNFRIVEAENGEKGLEACRLELPDAVLLDWNMPVMDGYEFLRNLRRMPGGDQPKVVF CTTENDVAHIARALHAGANEYIMKPFDKDIVTAKFQEIGLI
Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786911, Length=106, Percent_Identity=38.6792452830189, Blast_Score=73, Evalue=7e-15, Organism=Escherichia coli, GI1788191, Length=116, Percent_Identity=37.0689655172414, Blast_Score=70, Evalue=3e-14, Organism=Escherichia coli, GI1786599, Length=117, Percent_Identity=31.6239316239316, Blast_Score=67, Evalue=3e-13, Organism=Escherichia coli, GI1790299, Length=109, Percent_Identity=38.5321100917431, Blast_Score=64, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001867 - InterPro: IPR001789 - InterPro: IPR011991 [H]
Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]
EC number: NA
Molecular weight: Translated: 13696; Mature: 13696
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCLVVDDSSVIRKVARRILEGFNFRIVEAENGEKGLEACRLELPDAVLLDWNMPVMDG CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHH YEFLRNLRRMPGGDQPKVVFCTTENDVAHIARALHAGANEYIMKPFDKDIVTAKFQEIGL HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC I C >Mature Secondary Structure MKTCLVVDDSSVIRKVARRILEGFNFRIVEAENGEKGLEACRLELPDAVLLDWNMPVMDG CCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCHHH YEFLRNLRRMPGGDQPKVVFCTTENDVAHIARALHAGANEYIMKPFDKDIVTAKFQEIGL HHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1532388; 8905232; 9278503 [H]