Definition Nitrobacter winogradskyi Nb-255, complete genome.
Accession NC_007406
Length 3,402,093

Click here to switch to the map view.

The map label for this gene is 75674677

Identifier: 75674677

GI number: 75674677

Start: 536402

End: 536722

Strand: Direct

Name: 75674677

Synonym: Nwi_0479

Alternate gene names: NA

Gene position: 536402-536722 (Clockwise)

Preceding gene: 75674676

Following gene: 75674678

Centisome position: 15.77

GC content: 67.91

Gene sequence:

>321_bases
GTGGAACCGTGGCGGTATTCTTCGCAGGGCCTCGCTATCGCCTTGCGGGTGACGCCGCGTGGCGGCCGTGACGCGATCGA
CGGCATTGAAATGCTGGCGGACGGACGGCCGGTGGTGAAGGTTCGCGTCCGCGCCGTTGCCGACGGCGGCGAGGCCAACC
GCGCTGTCACGGCGGTGCTGGCGAAGGCGCTGGGCGTACGAAAAATCGATGTCCGGATACTCGCGGGAGCAACCTCGCGG
CTGAAGCAGGTCGCGGTCGAGGGCGATCCGGTCCAGCTCGGCAACGCCCTGCGCGCATTGACGGCGGTTCAACCGAAATA
G

Upstream 100 bases:

>100_bases
GGCTCGACATCTCTCCGATCATCCTGATTCTGATCATCCTGTTCATGCAGCGGGTCATCACCTACTACATCTATCCTGCC
GTGTTCTGATCGGCAGCCGG

Downstream 100 bases:

>100_bases
CCTGAACTGGGGATCAGCATGGCGGCCAGTATCATCGATGGAAAAGTCATCGCCGCCGATTTGCGCGCGCGGGTGGCCGG
TGAGGTGACGCGGATCAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MEPWRYSSQGLAIALRVTPRGGRDAIDGIEMLADGRPVVKVRVRAVADGGEANRAVTAVLAKALGVRKIDVRILAGATSR
LKQVAVEGDPVQLGNALRALTAVQPK

Sequences:

>Translated_106_residues
MEPWRYSSQGLAIALRVTPRGGRDAIDGIEMLADGRPVVKVRVRAVADGGEANRAVTAVLAKALGVRKIDVRILAGATSR
LKQVAVEGDPVQLGNALRALTAVQPK
>Mature_106_residues
MEPWRYSSQGLAIALRVTPRGGRDAIDGIEMLADGRPVVKVRVRAVADGGEANRAVTAVLAKALGVRKIDVRILAGATSR
LKQVAVEGDPVQLGNALRALTAVQPK

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003746 [H]

Pfam domain/function: PF02594 DUF167 [H]

EC number: NA

Molecular weight: Translated: 11165; Mature: 11165

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPWRYSSQGLAIALRVTPRGGRDAIDGIEMLADGRPVVKVRVRAVADGGEANRAVTAVL
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHH
AKALGVRKIDVRILAGATSRLKQVAVEGDPVQLGNALRALTAVQPK
HHHHCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEPWRYSSQGLAIALRVTPRGGRDAIDGIEMLADGRPVVKVRVRAVADGGEANRAVTAVL
CCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHH
AKALGVRKIDVRILAGATSRLKQVAVEGDPVQLGNALRALTAVQPK
HHHHCCEEEEEEEEECCHHHHHHHHCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA