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The map label for this gene is ctpA [H]

Identifier: 75674647

GI number: 75674647

Start: 505255

End: 506610

Strand: Direct

Name: ctpA [H]

Synonym: Nwi_0449

Alternate gene names: 75674647

Gene position: 505255-506610 (Clockwise)

Preceding gene: 75674646

Following gene: 75674648

Centisome position: 14.85

GC content: 62.39

Gene sequence:

>1356_bases
ATGATGCGCAAGGTTTCCCTTATTGTTCTCAGCGCTGCCGCGGGTGCCGCGTTGACGCTGTTCGTGACGCAGCCGCGATC
CGTGCTGATGGGATCGAGCGCGCGCGCCGCGACGTCGGATACCTATCGCCAGCTCAACCTGTTCGGCGACGTGTTCGAGC
GTGTCCGCACCGATTACGTCGAAAAACCCGATGACAGCAAGCTGGTCGAATCGGCCATCAGCGGCATGCTCACGGGTCTC
GATCCGCATTCGAGCTACATGGATGCAAAGAGCTTCCGCGACATGCAGGTCCAGACCCGCGGTGAATTCGGCGGCCTCGG
CATCGAGGTGACGATGGAGGATGGCCTGGTCAAGGTGGTCTCGCCGATCGACGACACGCCGGCGTCAAAGGCGGGGATCC
TCGCGAACGACATCATCACCAATCTCGACGACGAGGCGGTGCAGGGCCTGACCCTCAACCAGGCCGTCGACAAGATGCGC
GGCCCGATCGGCACCAAGATCAAGCTGAAGATCATCCGTAAGGGACAAGATAATCCGATCGACGTGACGCTGGTGCGCGA
CAACATTCGTGTCCGCTCGGTTCGTTCGCGGACGGAGTCCGACGACATCGCCTATATCCGCATCACGACCTTCAACGAGC
AGACCACCGAGGGACTGAAGAAGTCGGTTTCCGACCTCCAGAGCCAGATCGGTGACAAGCTCAAGGGGTATATCATCGAT
CTGCGAAACAACCCCGGCGGGTTGCTCGAGGAAGCCGTGACCGTTTCAGATGCCTTCCTCGATCGCGGCGAGATCGTGTC
GACGCGCGGGCGCAACGCCGAGGAAACCCAGCGGCGCAGCGCGCATCCGGGTGACCTCGCCAAAGGCAAGCCGGTGATCA
TTCTGGTCAACGGCGGATCGGCATCCGCGTCGGAAATCGTCGCCGGCGCGTTGCAGGACCACAAGCGGGCGACCCTGATC
GGCACCCGCTCGTTCGGCAAGGGCTCGGTGCAGACCATCATTCCCCTCGGCTCCGGCAATGGCGCGCTCCGGCTGACGAC
CGCGCGCTATTATACGCCCTCGGGCCGCTCGATTCAGGCCAAGGGCATCGTTCCGGATATCGAGGTGCTTCAGGATGTGC
CCGATGAATTGAGGTCACGGACCGACACCAAGGGCGAGGCTTCGCTGCGGGGACACCTGCGAAACGGCAACGACGAGAAG
ACAGGCTCGCAATCCTACGTCCCGCCGGACGCCAAGAACGACAAGGCGCTCAAGATGGCCGGAGACCTTCTGCGCGGCGT
CAAGATCAACGCCTCTTCGCCGCCCTCCAACAATAAAGCGGCGATCGAAAAGCCCGCGAACAAGGCGGCGAACTGA

Upstream 100 bases:

>100_bases
ACGCTAGCCAGCCCGTTCTCTACATCGAGTTCCGTAAGGACGGCACTCCCATTGATCCAGGCCCGTGGTGGGCCGCTAAC
AGAGGCCAAAAGGTTCGCGG

Downstream 100 bases:

>100_bases
TCCTTTGAAGGGGTGCGGTGTTTCGGAGCCGGGCGGCCTTTGGGGCCGCCCGGTTCGTTTGCGTGCCGGTTACTGCAAGT
CGCCTGATCTCGCATTGCCG

Product: peptidase S41A

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 451; Mature: 451

Protein sequence:

>451_residues
MMRKVSLIVLSAAAGAALTLFVTQPRSVLMGSSARAATSDTYRQLNLFGDVFERVRTDYVEKPDDSKLVESAISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVDKMR
GPIGTKIKLKIIRKGQDNPIDVTLVRDNIRVRSVRSRTESDDIAYIRITTFNEQTTEGLKKSVSDLQSQIGDKLKGYIID
LRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHPGDLAKGKPVIILVNGGSASASEIVAGALQDHKRATLI
GTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGRSIQAKGIVPDIEVLQDVPDELRSRTDTKGEASLRGHLRNGNDEK
TGSQSYVPPDAKNDKALKMAGDLLRGVKINASSPPSNNKAAIEKPANKAAN

Sequences:

>Translated_451_residues
MMRKVSLIVLSAAAGAALTLFVTQPRSVLMGSSARAATSDTYRQLNLFGDVFERVRTDYVEKPDDSKLVESAISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVDKMR
GPIGTKIKLKIIRKGQDNPIDVTLVRDNIRVRSVRSRTESDDIAYIRITTFNEQTTEGLKKSVSDLQSQIGDKLKGYIID
LRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHPGDLAKGKPVIILVNGGSASASEIVAGALQDHKRATLI
GTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGRSIQAKGIVPDIEVLQDVPDELRSRTDTKGEASLRGHLRNGNDEK
TGSQSYVPPDAKNDKALKMAGDLLRGVKINASSPPSNNKAAIEKPANKAAN
>Mature_451_residues
MMRKVSLIVLSAAAGAALTLFVTQPRSVLMGSSARAATSDTYRQLNLFGDVFERVRTDYVEKPDDSKLVESAISGMLTGL
DPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVVSPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVDKMR
GPIGTKIKLKIIRKGQDNPIDVTLVRDNIRVRSVRSRTESDDIAYIRITTFNEQTTEGLKKSVSDLQSQIGDKLKGYIID
LRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHPGDLAKGKPVIILVNGGSASASEIVAGALQDHKRATLI
GTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGRSIQAKGIVPDIEVLQDVPDELRSRTDTKGEASLRGHLRNGNDEK
TGSQSYVPPDAKNDKALKMAGDLLRGVKINASSPPSNNKAAIEKPANKAAN

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=319, Percent_Identity=30.4075235109718, Blast_Score=128, Evalue=6e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 48409; Mature: 48409

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKVSLIVLSAAAGAALTLFVTQPRSVLMGSSARAATSDTYRQLNLFGDVFERVRTDYV
CCCEEEEEEEEECCCCEEEEEEECCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
EKPDDSKLVESAISGMLTGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVV
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEEEEE
SPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVDKMRGPIGTKIKLKIIRKGQDNPI
CCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCE
DVTLVRDNIRVRSVRSRTESDDIAYIRITTFNEQTTEGLKKSVSDLQSQIGDKLKGYIID
EEEEEECCCEEEHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
LRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHPGDLAKGKPVIILVNGGS
EECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCC
ASASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGRSIQA
CCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEE
KGIVPDIEVLQDVPDELRSRTDTKGEASLRGHLRNGNDEKTGSQSYVPPDAKNDKALKMA
CCCCCHHHHHHCCHHHHHHCCCCCCCHHHECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GDLLRGVKINASSPPSNNKAAIEKPANKAAN
HHHHCCEEEECCCCCCCCCCEEECCCCCCCC
>Mature Secondary Structure
MMRKVSLIVLSAAAGAALTLFVTQPRSVLMGSSARAATSDTYRQLNLFGDVFERVRTDYV
CCCEEEEEEEEECCCCEEEEEEECCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHC
EKPDDSKLVESAISGMLTGLDPHSSYMDAKSFRDMQVQTRGEFGGLGIEVTMEDGLVKVV
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEECCCCCCEEEEEEECCCEEEEE
SPIDDTPASKAGILANDIITNLDDEAVQGLTLNQAVDKMRGPIGTKIKLKIIRKGQDNPI
CCCCCCCCCCCCCCHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCEEEEEEEECCCCCCE
DVTLVRDNIRVRSVRSRTESDDIAYIRITTFNEQTTEGLKKSVSDLQSQIGDKLKGYIID
EEEEEECCCEEEHHHCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEE
LRNNPGGLLEEAVTVSDAFLDRGEIVSTRGRNAEETQRRSAHPGDLAKGKPVIILVNGGS
EECCCCCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCCCCCCCCCCCEEEEEECCC
ASASEIVAGALQDHKRATLIGTRSFGKGSVQTIIPLGSGNGALRLTTARYYTPSGRSIQA
CCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEEEEEECCCCCEEEE
KGIVPDIEVLQDVPDELRSRTDTKGEASLRGHLRNGNDEKTGSQSYVPPDAKNDKALKMA
CCCCCHHHHHHCCHHHHHHCCCCCCCHHHECCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
GDLLRGVKINASSPPSNNKAAIEKPANKAAN
HHHHCCEEEECCCCCCCCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]