| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is ubiG
Identifier: 75674579
GI number: 75674579
Start: 427444
End: 428229
Strand: Direct
Name: ubiG
Synonym: Nwi_0381
Alternate gene names: 75674579
Gene position: 427444-428229 (Clockwise)
Preceding gene: 75674578
Following gene: 75674584
Centisome position: 12.56
GC content: 63.99
Gene sequence:
>786_bases ATGACCATGCAAGTCGATCCTTCCGCGAATTCTTCAGCCGCGTCTTCAGCCGCACCCGGAACGACCGTCGATCGCGCCGA GATCGAAAAATTCTCGAAGTTGTCGCAGGAATGGTGGGATCCCACCGGCAAGATGGCGCCGCTGCACAGGATCAACCCGC TGCGGCTTCAGTTCATCCGCGACGCCGCCTGCCGCAAGTTCGATCGCAACGCCCGCAGCCTGAACTGTCTGGCGGGCCTG CGGCTGCTCGACATCGGCTGCGGCGCGGGCCTTCTGTGCGAGCCGTTCACGCGGCTTGGCGCGCAGGTGATCGGGGTCGA TCCTTCCGCGTCCAATATCGCCGCGGCGAAGCTCCACGCCGAGAAAGCCCATCTGTCGATCGATTATCGCTGCACCACCG TGGAGGACATGGACGTCCGGGAGCGCTTCGACATCATCCTCGCGATGGAGGTGGTGGAGCATGTCGCCGATGTCGGGCTG TTCCTCGATCGCTGCGCGGCGATGCTGAAGCCGGGCGGGATGATGGCGGCGTCGACCCTCAACCGCAACTGGAAGAGCTT TGCACTGGGCATCGTCGCGGCCGAATATGTGTTGCGCTGGCTGCCGCGCGGCACGCATCAGTGGGACAAGTTCGTCACCC CGGACGAACTGGCGCGCCACTTCGAGCGCAACGGACTCGGCATTACCGAGCAGTCCGGCGTGGTCTACAGCCCGTTCGGG GACAGATGGAGCCTGTCATCCGACATGGACGTCAACTACATGGTGGTCGCCGAAGCGGTGGGATGA
Upstream 100 bases:
>100_bases GATCGCCGTGGCCGCCTTTATCCGTGTCGAGGATGTTCGAGACCGTGACCACTGATACTGTTCCAGAACCCCGTCATCTC GTCACAGGAGCCGCGCGGCA
Downstream 100 bases:
>100_bases GGCTGCTCGTGTCATCGCCGGAAAATGCTCTAATTCCGGTCGTCCGGCGGCACTGGCAGCGACCCGACCTCGACGCCTTC CTCGATCAGCGATTTCGCCT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MTMQVDPSANSSAASSAAPGTTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIRDAACRKFDRNARSLNCLAGL RLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHAEKAHLSIDYRCTTVEDMDVRERFDIILAMEVVEHVADVGL FLDRCAAMLKPGGMMAASTLNRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFG DRWSLSSDMDVNYMVVAEAVG
Sequences:
>Translated_261_residues MTMQVDPSANSSAASSAAPGTTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIRDAACRKFDRNARSLNCLAGL RLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHAEKAHLSIDYRCTTVEDMDVRERFDIILAMEVVEHVADVGL FLDRCAAMLKPGGMMAASTLNRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFG DRWSLSSDMDVNYMVVAEAVG >Mature_260_residues TMQVDPSANSSAASSAAPGTTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIRDAACRKFDRNARSLNCLAGLR LLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHAEKAHLSIDYRCTTVEDMDVRERFDIILAMEVVEHVADVGLF LDRCAAMLKPGGMMAASTLNRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFGD RWSLSSDMDVNYMVVAEAVG
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. UbiG/COQ3 family
Homologues:
Organism=Homo sapiens, GI118600965, Length=242, Percent_Identity=42.5619834710744, Blast_Score=207, Evalue=7e-54, Organism=Escherichia coli, GI1788564, Length=236, Percent_Identity=39.8305084745763, Blast_Score=182, Evalue=2e-47, Organism=Caenorhabditis elegans, GI115533050, Length=246, Percent_Identity=34.9593495934959, Blast_Score=150, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6324476, Length=266, Percent_Identity=28.9473684210526, Blast_Score=110, Evalue=2e-25, Organism=Drosophila melanogaster, GI281365311, Length=261, Percent_Identity=31.8007662835249, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI24585589, Length=223, Percent_Identity=34.9775784753363, Blast_Score=134, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UBIG_NITWN (Q3SVP3)
Other databases:
- EMBL: CP000115 - RefSeq: YP_317000.1 - ProteinModelPortal: Q3SVP3 - SMR: Q3SVP3 - STRING: Q3SVP3 - GeneID: 3676966 - GenomeReviews: CP000115_GR - KEGG: nwi:Nwi_0381 - NMPDR: fig|323098.3.peg.850 - eggNOG: COG2227 - HOGENOM: HBG738842 - OMA: KFITPDE - PhylomeDB: Q3SVP3 - ProtClustDB: PRK05134 - BioCyc: NWIN323098:NWI_0381-MONOMER - HAMAP: MF_00472 - InterPro: IPR013216 - InterPro: IPR010233 - TIGRFAMs: TIGR01983
Pfam domain/function: PF08241 Methyltransf_11
EC number: =2.1.1.64
Molecular weight: Translated: 28745; Mature: 28614
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMQVDPSANSSAASSAAPGTTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIR CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH DAACRKFDRNARSLNCLAGLRLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHA HHHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHH EKAHLSIDYRCTTVEDMDVRERFDIILAMEVVEHVADVGLFLDRCAAMLKPGGMMAASTL HHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH NRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFG CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEECCCC DRWSLSSDMDVNYMVVAEAVG CCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure TMQVDPSANSSAASSAAPGTTVDRAEIEKFSKLSQEWWDPTGKMAPLHRINPLRLQFIR CEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH DAACRKFDRNARSLNCLAGLRLLDIGCGAGLLCEPFTRLGAQVIGVDPSASNIAAAKLHA HHHHHHHHCCCCHHHHHHCCCCEEECCCCCCHHHHHHHCCCEEEECCCCCCCHHHHHHHH EKAHLSIDYRCTTVEDMDVRERFDIILAMEVVEHVADVGLFLDRCAAMLKPGGMMAASTL HHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH NRNWKSFALGIVAAEYVLRWLPRGTHQWDKFVTPDELARHFERNGLGITEQSGVVYSPFG CCCHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHCCCCCCCCCCEEECCCC DRWSLSSDMDVNYMVVAEAVG CCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA