| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
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The map label for this gene is thrC [H]
Identifier: 75674428
GI number: 75674428
Start: 259851
End: 261269
Strand: Direct
Name: thrC [H]
Synonym: Nwi_0229
Alternate gene names: 75674428
Gene position: 259851-261269 (Clockwise)
Preceding gene: 75674427
Following gene: 75674429
Centisome position: 7.64
GC content: 63.64
Gene sequence:
>1419_bases TTGACGCACTATCTTTCGACACGGGGAGAGAATCAAAAACTCGGTTTCTCTGATGTGATGCTGGCCGGACTCGCACGGGA CGGCGGTCTCTACGTGCCGGAGGTCTGGCCGCAATTGCGGCTCGATACGGTTGCCGCCTTTTTCGGCAGGCCCTACTCGG AGGTAGCCGTTGAGGTGATCCGGCCGTTCGTGGGCGGAGATATCGCCGACGTCGACCTCGCTCGCATGGCCAACGAGGCT TATGCGACCTTCCGGCACCCCGCGGTGGTCCCGCTCGATCAGATAGGCTCTCAACAGTTCCTGCTGGAACTGTTTCACGG TCCGACGCTGGCGTTCAAGGACGTGGCGATGCAGTTGCTGTCGCGGCTGATGGACCACGTTCTGGCGAGACGCGGCCAGC GCACCACCATCGTCGTGGCCACCTCGGGTGACACCGGCGGCGCGGCAGTGGATGCATTCGCCAACCGTGCGAATGTTGAT CTGATCGCCTTGTTCCCGGACGGCCGCATTTCCGAGGTGCAGCGACGCATGATGACGACGACGGCCGCGCCGAATGTTCA TGCGCTTGCGGTCAAGGGCACGTTCGACGACTGCCAGGCGATCGTGAAGGGCCTGTTCAACAATCACCGCTTCCGCGACG AGGTATCGCTCTCGGGAGTCAACTCGATCAACTGGGCGCGGATCGTTGCACAGGTAGTGTATTACTTCACCTCTGCGGTC GCGCTCGGCGCGCCCGCGCGCGCCGTTGATTTTACCGTGCCGACCGGTAATTTCGGCGACATCTTCGCCGGTTACGTCGC AAAGCGCATGGGACTGCCGGTACGCCGGCTGCGGATCGCCGCCAACATCAATGATATTCTGCCGCGCACGCTGAAGACCG GAATTTATGAGGTGCGCGAGGTTCACGCCACCTCTTCGCCGTCGATGGACATTCAGGTGTCGTCGAACTTCGAACGGCTG TTGTTCGAGGCGACCGGGCGTGATGCCGCGCAGGTGCGTGCGCTGATGGCCTCGTTGCAGCAGTCCGGCCGTTTCGCGCT ACCGGAGTCGGTTCTGGCCGCGATGCGCGCGGATTTCGATGCCGAATGTGCCGACGAAACGGAGACCGCGGCCACGATCC GCACGGCGTGGCGCGAAGCCGGAGATCTGCTCGACCCGCATACGGCTGTTGCCTTGACGGTGGCCGATCGTGACGCGGCG GAGTCGCGCGTTCCCAACATCGTGCTCGCCACCGCCCATGCCGCCAAGTTCCCTGACGCCGTTGAGGCGGCCTGCGGCGT ACGGCCGCCGTTGCCGGCCTGGCTCGACGGCTTGATGACCCGGCCCGAGCGGATCACGATCGTGAACAACGATCAGGCAG AAATCGAACGGTTCGTGCTGTCCGTCAGCCGCGCCGCCAATCACGGAGTTACCGGATGA
Upstream 100 bases:
>100_bases ATTTCAAGAGGCTTTATGATACGCAGCGCCTGTCACCGACATTGACGGCGGCTCGTGGCATCAGACGTAAGGCAACAAAC TTCGGCGCTTGGGGGCCGGC
Downstream 100 bases:
>100_bases GTGTCAATGTCACGAAGCTGTCGTCCGGCCTCACCGTCGTGACTGATGACATGCCACATCTGGAAACCGCCGCGCTCGGT GTCTGGACCGGAGTCGGCGG
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 472; Mature: 471
Protein sequence:
>472_residues MTHYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVIRPFVGGDIADVDLARMANEA YATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLLSRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVD LIALFPDGRISEVQRRMMTTTAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAV ALGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVREVHATSSPSMDIQVSSNFERL LFEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFDAECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAA ESRVPNIVLATAHAAKFPDAVEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG
Sequences:
>Translated_472_residues MTHYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVIRPFVGGDIADVDLARMANEA YATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLLSRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVD LIALFPDGRISEVQRRMMTTTAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAV ALGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVREVHATSSPSMDIQVSSNFERL LFEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFDAECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAA ESRVPNIVLATAHAAKFPDAVEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG >Mature_471_residues THYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVIRPFVGGDIADVDLARMANEAY ATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLLSRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVDL IALFPDGRISEVQRRMMTTTAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAVA LGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVREVHATSSPSMDIQVSSNFERLL FEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFDAECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAAE SRVPNIVLATAHAAKFPDAVEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
Organism=Homo sapiens, GI149193323, Length=454, Percent_Identity=34.8017621145374, Blast_Score=273, Evalue=3e-73, Organism=Homo sapiens, GI153792148, Length=437, Percent_Identity=35.2402745995423, Blast_Score=260, Evalue=2e-69, Organism=Escherichia coli, GI1786185, Length=431, Percent_Identity=33.1786542923434, Blast_Score=214, Evalue=7e-57, Organism=Saccharomyces cerevisiae, GI6319901, Length=456, Percent_Identity=41.4473684210526, Blast_Score=327, Evalue=2e-90,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 51189; Mature: 51058
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVI CCCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHH RPFVGGDIADVDLARMANEAYATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLL HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHH SRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVDLIALFPDGRISEVQRRMMTT HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH TAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAV CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVRE HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VHATSSPSMDIQVSSNFERLLFEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFD HHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC AECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAAESRVPNIVLATAHAAKFPDA CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCEEEEEECHHHCCCHH VEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG HHHHCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure THYLSTRGENQKLGFSDVMLAGLARDGGLYVPEVWPQLRLDTVAAFFGRPYSEVAVEVI CCCCCCCCCCCCCCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHH RPFVGGDIADVDLARMANEAYATFRHPAVVPLDQIGSQQFLLELFHGPTLAFKDVAMQLL HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHH SRLMDHVLARRGQRTTIVVATSGDTGGAAVDAFANRANVDLIALFPDGRISEVQRRMMTT HHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHH TAAPNVHALAVKGTFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAV CCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALGAPARAVDFTVPTGNFGDIFAGYVAKRMGLPVRRLRIAANINDILPRTLKTGIYEVRE HCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHH VHATSSPSMDIQVSSNFERLLFEATGRDAAQVRALMASLQQSGRFALPESVLAAMRADFD HHCCCCCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC AECADETETAATIRTAWREAGDLLDPHTAVALTVADRDAAESRVPNIVLATAHAAKFPDA CCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHCCEEEEEECHHHCCCHH VEAACGVRPPLPAWLDGLMTRPERITIVNNDQAEIERFVLSVSRAANHGVTG HHHHCCCCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1333566; 10984043 [H]