| Definition | Nitrobacter winogradskyi Nb-255, complete genome. |
|---|---|
| Accession | NC_007406 |
| Length | 3,402,093 |
Click here to switch to the map view.
The map label for this gene is ctaE [H]
Identifier: 75674427
GI number: 75674427
Start: 258809
End: 259663
Strand: Direct
Name: ctaE [H]
Synonym: Nwi_0228
Alternate gene names: 75674427
Gene position: 258809-259663 (Clockwise)
Preceding gene: 75674426
Following gene: 75674428
Centisome position: 7.61
GC content: 64.21
Gene sequence:
>855_bases ATGGCTACGGCGCAAGTCAAGCACGATTACCACCTGGTCGACCCGAGTCCGTGGCCGATCGTAGGCGCGACCGCGGCTTT CATCATGGCCGTGGGCGCGATCCTGTGGATGCATCATATGACCGCGGCCGCGCCGATCATCTTCGGCATCGGCGTGGTCG GCGTGCTCTACACCATGGCGAGCTGGTGGGCGGATGTGATCCGCGAAGCCGAGCACAAGGGCGATCACACCCGCGTGGTG CAGATCAGCCATCGCTATGGCATGATCCTGTTCATCACCTCCGAGGTGATGTTCTTCGTCGCCTGGTTCTGGGCCTTCTT CAACTCCGCGCTGTTCCCGGGCGACCCCGTGCATGTGACGCGCGAGGCCCTGTTCGGCGGCGTCTGGCCGCCCAAGGGCA TCCAGACCTTCGATCCCTGGCACCTGCCGCTGCTCAACACCCTGATCCTGCTGACCTCGGGAACCACCGTGACGTGGGCG CACCACGCCCTGCTCAACGGCGACCGCAAGGGACTGAAGTGGGGCCTGATCCTGACCATCGCGCTCGGCGCCATCTTCAC CTGCGTCCAGGCTTATGAGTATCAGCACGCCGCCTTCAGCTTCGCCGGCAACGTCTACGGCGCCACCTTCTTCATGGCGA CCGGATTCCACGGCTTCCACGTGCTGGTCGGAACCATCTTCCTGATCGTCTGCCTGTTCCGCGCCAACGCGGGACACTTC ACCCCCTCCCAGCACCTCGGCTTCGAGTTCGCCGCCTGGTACTGGCACTTCGTCGACGTGGTGTGGCTGTTCCTGTTCGT CTGCATCTATATCTGGGGCAACGGTGCCGCCGCCATGGCCCACGCCGCACACTGA
Upstream 100 bases:
>100_bases CTGAGCTTCGAGGGCCGACGCGTTTAGTTACCGACGCGTTTTGTTGTGAGACCAATAGGTGCCCAATACCGCCGGCACCG CTAAGGGAGAGAGACCGCAA
Downstream 100 bases:
>100_bases CCGCCAACCCGGCAAAAACAACAATAATCAAGGGCGGCCATAAGGCCGCCCTTTCTCTTTTCGAGCTGTCCGTCTGATTT CTTCTTTATTTCAAGAGGCT
Product: cytochrome c oxidase, subunit III
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 284; Mature: 283
Protein sequence:
>284_residues MATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMASWWADVIREAEHKGDHTRVV QISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVTREALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWA HHALLNGDRKGLKWGLILTIALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHF TPSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH
Sequences:
>Translated_284_residues MATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMASWWADVIREAEHKGDHTRVV QISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVTREALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWA HHALLNGDRKGLKWGLILTIALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHF TPSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH >Mature_283_residues ATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMASWWADVIREAEHKGDHTRVVQ ISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVTREALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWAH HALLNGDRKGLKWGLILTIALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHFT PSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=268, Percent_Identity=48.5074626865672, Blast_Score=244, Evalue=4e-65, Organism=Saccharomyces cerevisiae, GI6226542, Length=267, Percent_Identity=39.3258426966292, Blast_Score=187, Evalue=1e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 31666; Mature: 31535
Theoretical pI: Translated: 7.20; Mature: 7.20
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMA CCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWWADVIREAEHKGDHTRVVQISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVT HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHH REALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWAHHALLNGDRKGLKWGLILTI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCHHHHHHHH ALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC TPSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC >Mature Secondary Structure ATAQVKHDYHLVDPSPWPIVGATAAFIMAVGAILWMHHMTAAAPIIFGIGVVGVLYTMA CCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SWWADVIREAEHKGDHTRVVQISHRYGMILFITSEVMFFVAWFWAFFNSALFPGDPVHVT HHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCHHHH REALFGGVWPPKGIQTFDPWHLPLLNTLILLTSGTTVTWAHHALLNGDRKGLKWGLILTI HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHHCCCCCCCHHHHHHHH ALGAIFTCVQAYEYQHAAFSFAGNVYGATFFMATGFHGFHVLVGTIFLIVCLFRANAGHF HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC TPSQHLGFEFAAWYWHFVDVVWLFLFVCIYIWGNGAAAMAHAAH CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 3019767; 2832167; 7651515 [H]