| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318796
Identifier: 74318796
GI number: 74318796
Start: 2858109
End: 2858663
Strand: Direct
Name: 74318796
Synonym: Tbd_2778
Alternate gene names: NA
Gene position: 2858109-2858663 (Clockwise)
Preceding gene: 74318795
Following gene: 74318797
Centisome position: 98.22
GC content: 72.25
Gene sequence:
>555_bases ATGAAATATCCTCTCGCGCTGTCCCTCGCCACCCTGCTCGTGACGCCGGCCTGGGCCGATCCGCCCGCCCACGCACCGGC CCATGGCTACCATAAAAAATCGTACGACAAGCCGGCAAAGGCCAAGCACTATCAGGGCCGCAGCGGCGCCGTCTACGCGC ACGACTACGGCATCTCGGCCGGACGCTGCAACAGCGACGAAATCGGCACCGTCATCGGCGGCGTCTCGGGCGCCGTCATC GGGGGCCAGGTCGCCGGCGGCGACGACCGCGTGGTCGGCATGGTCGTCGGCGGGGTGCTCGGCGCCGTCCTCGGCCACGC GATCGGCGAAAGCATCGACGCGCGCGACCGTGCCTGCATGGGCCACGCGCTCGAACTCGGCCGTCCGGGCGTCCCCGTCG TGTGGCACACCGACGGCCACCGCTACCACTTCACGCCGGGGGCGCTGGCGGGCGACGGCTGCCGCCGGGCCACGGTGAGC GTCGACGGCGGCAGACCGCGCGCCATGCTCGCCTGCCCGGCAGGCCGCGGCCAGTGGACCTTCCGCCGTAGTTGA
Upstream 100 bases:
>100_bases CCGCAGCGCACGGCACGACCACGACCGGCTCGCAAGCGGCACGCCCTACAGTCGGCACGCCTGGGGTCGTTAAGCTCTTA GTCCCGACCAAGGAGATGCA
Downstream 100 bases:
>100_bases GGGGGCCGGCGCGGCCCGGCCAGCGGCGCCAAGCCTGTTAGAATTCAGGCTTTGCGTCCTGGCCCTTTTTCCGGGCTACA GCCATGTCCGCCCTCAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MKYPLALSLATLLVTPAWADPPAHAPAHGYHKKSYDKPAKAKHYQGRSGAVYAHDYGISAGRCNSDEIGTVIGGVSGAVI GGQVAGGDDRVVGMVVGGVLGAVLGHAIGESIDARDRACMGHALELGRPGVPVVWHTDGHRYHFTPGALAGDGCRRATVS VDGGRPRAMLACPAGRGQWTFRRS
Sequences:
>Translated_184_residues MKYPLALSLATLLVTPAWADPPAHAPAHGYHKKSYDKPAKAKHYQGRSGAVYAHDYGISAGRCNSDEIGTVIGGVSGAVI GGQVAGGDDRVVGMVVGGVLGAVLGHAIGESIDARDRACMGHALELGRPGVPVVWHTDGHRYHFTPGALAGDGCRRATVS VDGGRPRAMLACPAGRGQWTFRRS >Mature_184_residues MKYPLALSLATLLVTPAWADPPAHAPAHGYHKKSYDKPAKAKHYQGRSGAVYAHDYGISAGRCNSDEIGTVIGGVSGAVI GGQVAGGDDRVVGMVVGGVLGAVLGHAIGESIDARDRACMGHALELGRPGVPVVWHTDGHRYHFTPGALAGDGCRRATVS VDGGRPRAMLACPAGRGQWTFRRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19087; Mature: 19087
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYPLALSLATLLVTPAWADPPAHAPAHGYHKKSYDKPAKAKHYQGRSGAVYAHDYGISA CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GRCNSDEIGTVIGGVSGAVIGGQVAGGDDRVVGMVVGGVLGAVLGHAIGESIDARDRACM CCCCCCCHHHHHCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GHALELGRPGVPVVWHTDGHRYHFTPGALAGDGCRRATVSVDGGRPRAMLACPAGRGQWT HHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE FRRS EECC >Mature Secondary Structure MKYPLALSLATLLVTPAWADPPAHAPAHGYHKKSYDKPAKAKHYQGRSGAVYAHDYGISA CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC GRCNSDEIGTVIGGVSGAVIGGQVAGGDDRVVGMVVGGVLGAVLGHAIGESIDARDRACM CCCCCCCHHHHHCCCCCEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH GHALELGRPGVPVVWHTDGHRYHFTPGALAGDGCRRATVSVDGGRPRAMLACPAGRGQWT HHHHHCCCCCCCEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCEE FRRS EECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA