Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318790

Identifier: 74318790

GI number: 74318790

Start: 2854796

End: 2854963

Strand: Direct

Name: 74318790

Synonym: Tbd_2772

Alternate gene names: NA

Gene position: 2854796-2854963 (Clockwise)

Preceding gene: 74318789

Following gene: 74318792

Centisome position: 98.11

GC content: 64.29

Gene sequence:

>168_bases
ATGTTCGGATGGGCTATCACGTTTCTGGTCATTGCCATTGCGGCAGGCATCTTCGGCTTCGCCGGCCTCGCCGGGACGGC
TGCCTGGATCGCAAAGGTCCTGTTCGTCGTGGGTCTGGCGGCCGTCCTCATCATGCTGGTGATGGGTCGCCGGCCGCCCA
CGGTCTAG

Upstream 100 bases:

>100_bases
CACAATGGATTGATTCTCAAGGGGAAAACGGCCCTGGCACGTCCTCTGCATCGGAACGACGCATCCCTTCGGGGCTCAGT
CATTTTGAAAGGAGAACGCC

Downstream 100 bases:

>100_bases
TCAATTCGTAACATCCCGGGGAGCTGCGGCTCCCCTTTTTTTCGTCCCGAAGCCGCGCTCGCCGCGCTTGTCGCAAAACG
CAGACAAAAAACCGCCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 55; Mature: 55

Protein sequence:

>55_residues
MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV

Sequences:

>Translated_55_residues
MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV
>Mature_55_residues
MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV

Specific function: Unknown

COG id: COG5487

COG function: function code S; Small integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0391 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2772_THIDA (Q3SF89)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_316530.1
- STRING:   Q3SF89
- GeneID:   3672838
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_2772
- NMPDR:   fig|292415.3.peg.2391
- eggNOG:   NOG146567
- OMA:   MIAWALI
- BioCyc:   TDEN292415:TBD_2772-MONOMER
- HAMAP:   MF_01361
- InterPro:   IPR009760
- PIRSF:   PIRSF036466

Pfam domain/function: PF07043 DUF1328

EC number: NA

Molecular weight: Translated: 5691; Mature: 5691

Theoretical pI: Translated: 12.51; Mature: 12.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d7c7248)-; HASH(0x1ec18400)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
>Mature Secondary Structure
MFGWAITFLVIAIAAGIFGFAGLAGTAAWIAKVLFVVGLAAVLIMLVMGRRPPTV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA