Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is fabZ [C]

Identifier: 74318765

GI number: 74318765

Start: 2826994

End: 2827311

Strand: Direct

Name: fabZ [C]

Synonym: Tbd_2747

Alternate gene names: 74318765

Gene position: 2826994-2827311 (Clockwise)

Preceding gene: 74318764

Following gene: 74318766

Centisome position: 97.15

GC content: 73.27

Gene sequence:

>318_bases
GTGAGCGAGCACTCACTACCGCTGGCGATCGCGGCCGACCACGCGGCCTACGCCGGGCATTTCCCGGGCCGTCCGATCCT
GCCCGGCGTCGTGCTGCTCGACGAGGCGCTGCACGCGCTCGCCGTGGCCGACGGGCGCAAGGCTGCGACCGGCCAGATCC
GTGCGGCCAAATTCCTCAGCCCGGTCACGCCGGGCGAGGGCTTGCGTCTCGATTACGCCGAGACCGCGCCGGGCGTTTTC
CGCTTCACGGTCGCGGCCGGCACGCGCACGGTCGCGAGCGGCGTCTTCGCGTTCGACGACCCCGGGAGCGCGGCATGA

Upstream 100 bases:

>100_bases
TTCTGCCGCGCCCGCTCGTCTTCGTCGACGCGCTGCCGCGCAACACCACGGGCAAGCTCGCGGCCGCCGCCGCACAAGCC
CTGGTCGCGGAGGCCGGCGC

Downstream 100 bases:

>100_bases
GCACGCCGGATCTGGCCGCTCGCGTCGAGTGGGCGCGACGTGGCGAGCGCAGCAACATGGCGATGCTGCGGATCATGACG
TGGATTTCGCTGCGCCTCGG

Product: hypothetical protein

Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]

Alternate protein names: Dehydratase; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase; Amp-Dependent Synthetase Or Ligase Protein; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase-Like; AMP-Dependent Synthetase And Ligase

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVF
RFTVAAGTRTVASGVFAFDDPGSAA

Sequences:

>Translated_105_residues
MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVF
RFTVAAGTRTVASGVFAFDDPGSAA
>Mature_104_residues
SEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVFR
FTVAAGTRTVASGVFAFDDPGSAA

Specific function: Involved In Saturated Fatty Acids Biosynthesis. [C]

COG id: COG0764

COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.2.1.- [C]

Molecular weight: Translated: 10710; Mature: 10579

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLS
CCCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCC
PVTPGEGLRLDYAETAPGVFRFTVAAGTRTVASGVFAFDDPGSAA
CCCCCCCEEEECCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCC
>Mature Secondary Structure 
SEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLS
CCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCC
PVTPGEGLRLDYAETAPGVFRFTVAAGTRTVASGVFAFDDPGSAA
CCCCCCCEEEECCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-3-hydroxy-acyl-ACP [C]

Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]

General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA