| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fabZ [C]
Identifier: 74318765
GI number: 74318765
Start: 2826994
End: 2827311
Strand: Direct
Name: fabZ [C]
Synonym: Tbd_2747
Alternate gene names: 74318765
Gene position: 2826994-2827311 (Clockwise)
Preceding gene: 74318764
Following gene: 74318766
Centisome position: 97.15
GC content: 73.27
Gene sequence:
>318_bases GTGAGCGAGCACTCACTACCGCTGGCGATCGCGGCCGACCACGCGGCCTACGCCGGGCATTTCCCGGGCCGTCCGATCCT GCCCGGCGTCGTGCTGCTCGACGAGGCGCTGCACGCGCTCGCCGTGGCCGACGGGCGCAAGGCTGCGACCGGCCAGATCC GTGCGGCCAAATTCCTCAGCCCGGTCACGCCGGGCGAGGGCTTGCGTCTCGATTACGCCGAGACCGCGCCGGGCGTTTTC CGCTTCACGGTCGCGGCCGGCACGCGCACGGTCGCGAGCGGCGTCTTCGCGTTCGACGACCCCGGGAGCGCGGCATGA
Upstream 100 bases:
>100_bases TTCTGCCGCGCCCGCTCGTCTTCGTCGACGCGCTGCCGCGCAACACCACGGGCAAGCTCGCGGCCGCCGCCGCACAAGCC CTGGTCGCGGAGGCCGGCGC
Downstream 100 bases:
>100_bases GCACGCCGGATCTGGCCGCTCGCGTCGAGTGGGCGCGACGTGGCGAGCGCAGCAACATGGCGATGCTGCGGATCATGACG TGGATTTCGCTGCGCCTCGG
Product: hypothetical protein
Products: trans-Delta2-enoyl-acyl-ACP; H2O [C]
Alternate protein names: Dehydratase; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase; Amp-Dependent Synthetase Or Ligase Protein; Acyl-Co A Synthetase/AMP-(Fatty) Acid Ligase-Like; AMP-Dependent Synthetase And Ligase
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVF RFTVAAGTRTVASGVFAFDDPGSAA
Sequences:
>Translated_105_residues MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVF RFTVAAGTRTVASGVFAFDDPGSAA >Mature_104_residues SEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLSPVTPGEGLRLDYAETAPGVFR FTVAAGTRTVASGVFAFDDPGSAA
Specific function: Involved In Saturated Fatty Acids Biosynthesis. [C]
COG id: COG0764
COG function: function code I; 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.- [C]
Molecular weight: Translated: 10710; Mature: 10579
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLS CCCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCC PVTPGEGLRLDYAETAPGVFRFTVAAGTRTVASGVFAFDDPGSAA CCCCCCCEEEECCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCC >Mature Secondary Structure SEHSLPLAIAADHAAYAGHFPGRPILPGVVLLDEALHALAVADGRKAATGQIRAAKFLS CCCCCCEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHCC PVTPGEGLRLDYAETAPGVFRFTVAAGTRTVASGVFAFDDPGSAA CCCCCCCEEEECCCCCCCEEEEEECCCCHHHHCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: D-3-hydroxy-acyl-ACP [C]
Specific reaction: D-3-hydroxy-acyl-ACP = trans-Delta2-enoyl-acyl-ACP + H2O [C]
General reaction: Carbon-Oxygen Lyases; Hydro-Lyases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA