| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318513
Identifier: 74318513
GI number: 74318513
Start: 2568449
End: 2569117
Strand: Direct
Name: 74318513
Synonym: Tbd_2495
Alternate gene names: NA
Gene position: 2568449-2569117 (Clockwise)
Preceding gene: 74318512
Following gene: 74318514
Centisome position: 88.27
GC content: 66.82
Gene sequence:
>669_bases ATGTCTAACCGCGACCCTGAGACCTCCAGCACTGCCCCTGCTGCCCCGCAGATCGACGCCGTCAACGAGTCCCGCCGCAG GCTGACGGGCGCAGCGCTGGGCGCATCGGCGATCTTCACGCTCGCGAGCCGTCCGGTGTGGGCGAACCAGTGCACGATTT CAGGCATGGCCTCGGGCAATCTGTCGCAGCCGGGCGGCGTCATCTGCGCCGGCTGCACGCCGGGTTACTGGCTGAACCAC CCGCTGAACTGGCCCTCCGACTTCCGACCGGGAACCTGCCTGCAGTGCGAGGCGACGGGCAGCGGCAACGTCTGCAGCGA ATGGGACAACGACGGCACGCGTTTCCCCTTCCCCGGCGCGCTGCGCGACGCGGGCAAGACGATGATGCAGGTGCTCGCGA TGAACGGCAACGAGGATCCCTATCAACTCGGCGCCCACGCGATCGCAGCGCTGCTGAACTCGGCGGCCCCCTACCCGGCG AACTACAGCTACGGCTACAACACACGGGACATCTACGACCTCTGGAACCGATACGCGGCCACCGATCCCGAGGGCCTGAA GAACATGTTCCAGTCGCTCAATGAACGCGTCTGCCCGCTCGGCAACGAGGGCGACGCGCAGCAGTGCACGGTCAGCCTCG ACGGGCCCAAGCCCGGCAAAAAGCGATAA
Upstream 100 bases:
>100_bases CCGCCCCGCACGCGCCCGCGGGCTTCGCCAGCCGGCATCGAGATGCTGGTGCGATTCTTGCTGGTAACCGGACGAATCCT AATAATGACTGAGGCTAGCC
Downstream 100 bases:
>100_bases ACTCGGAACGCTTTGTCCGTACCGACCAAAAAAGGAGCCGCCGTTCACGCTGATGGCTGGCTCTTAAAATCCTGGGACAA CGAGGCCGTTCTGTTCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MSNRDPETSSTAPAAPQIDAVNESRRRLTGAALGASAIFTLASRPVWANQCTISGMASGNLSQPGGVICAGCTPGYWLNH PLNWPSDFRPGTCLQCEATGSGNVCSEWDNDGTRFPFPGALRDAGKTMMQVLAMNGNEDPYQLGAHAIAALLNSAAPYPA NYSYGYNTRDIYDLWNRYAATDPEGLKNMFQSLNERVCPLGNEGDAQQCTVSLDGPKPGKKR
Sequences:
>Translated_222_residues MSNRDPETSSTAPAAPQIDAVNESRRRLTGAALGASAIFTLASRPVWANQCTISGMASGNLSQPGGVICAGCTPGYWLNH PLNWPSDFRPGTCLQCEATGSGNVCSEWDNDGTRFPFPGALRDAGKTMMQVLAMNGNEDPYQLGAHAIAALLNSAAPYPA NYSYGYNTRDIYDLWNRYAATDPEGLKNMFQSLNERVCPLGNEGDAQQCTVSLDGPKPGKKR >Mature_221_residues SNRDPETSSTAPAAPQIDAVNESRRRLTGAALGASAIFTLASRPVWANQCTISGMASGNLSQPGGVICAGCTPGYWLNHP LNWPSDFRPGTCLQCEATGSGNVCSEWDNDGTRFPFPGALRDAGKTMMQVLAMNGNEDPYQLGAHAIAALLNSAAPYPAN YSYGYNTRDIYDLWNRYAATDPEGLKNMFQSLNERVCPLGNEGDAQQCTVSLDGPKPGKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23755; Mature: 23623
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRDPETSSTAPAAPQIDAVNESRRRLTGAALGASAIFTLASRPVWANQCTISGMASGN CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC LSQPGGVICAGCTPGYWLNHPLNWPSDFRPGTCLQCEATGSGNVCSEWDNDGTRFPFPGA CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH LRDAGKTMMQVLAMNGNEDPYQLGAHAIAALLNSAAPYPANYSYGYNTRDIYDLWNRYAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC TDPEGLKNMFQSLNERVCPLGNEGDAQQCTVSLDGPKPGKKR CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC >Mature Secondary Structure SNRDPETSSTAPAAPQIDAVNESRRRLTGAALGASAIFTLASRPVWANQCTISGMASGN CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCC LSQPGGVICAGCTPGYWLNHPLNWPSDFRPGTCLQCEATGSGNVCSEWDNDGTRFPFPGA CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHH LRDAGKTMMQVLAMNGNEDPYQLGAHAIAALLNSAAPYPANYSYGYNTRDIYDLWNRYAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCC TDPEGLKNMFQSLNERVCPLGNEGDAQQCTVSLDGPKPGKKR CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA