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The map label for this gene is hmeC [H]

Identifier: 74318497

GI number: 74318497

Start: 2556194

End: 2556928

Strand: Reverse

Name: hmeC [H]

Synonym: Tbd_2479

Alternate gene names: 74318497

Gene position: 2556928-2556194 (Counterclockwise)

Preceding gene: 74318498

Following gene: 74318496

Centisome position: 87.87

GC content: 60.54

Gene sequence:

>735_bases
TTGTCTACTGTGACGATCATTTACGCCGGGATGTTCTACATCGCCACGCTGTTGCTGGTGGCAGGCCTGGTCTACAAGAT
TTTTGATTACAGCCGCACGCCTGCGCCGCTGAAAATCCCGACCACGCCGGCGCCGACCACCCAGAAGGGCGTCATCTACC
GGATGGCCAAGGAAGTCGTGCTGTTCGAATCCCTGTTCAAGTCCAACAAGTGGATCTGGGTGTTCGGCTGGCTCTTCCAT
TTCGGTCTGTTGCTGGTCCTGCTGCGTCACCTGCGCTACTTCACTCAGCCGGTCTGGTTCTGGGTCGACATCCTGCAGCC
TTTCGGCAAATACGCCAGCATCATGATGGTCATCGGCTTGGGCGGCCTGCTCGCGCGGCGTTTCCTGGTCGATCGCGTGC
GCTACATCTCGACGCCGTCGGATTACCTGATGCTCGTGCTGCTTCTCGCGATCGGCCTCTCCGGCATGATGATGACCTTC
GTTACGCACACCGACATCATCGCGTTGAAGGGCTTCTTCCTCGGGCTCATGTATCTGGACATCCAGCCCCTGCCGCAGGA
CCCGGCGCTGCTGGTCCACCTCGCGCTGGTGGCCTTGCTGATGGTGATCTTTCCGATCAGCAAGCTGTTGCACGCGCCCG
GCCTGTTCTTCAGCCCGACCCGCAACCAGGCCGACAATCCGCGCGAACGTCGCCACGTCGCGGCCTGGGCTGCGAGGCTG
GATCAAGGCAATTGA

Upstream 100 bases:

>100_bases
TCGGGCCGTCCGCTTAGCGGACGGCGCCGATTCCGGCTTGTTTCCAAATCGAATTCGGTTCGCGTTCGATTTGCAAACAA
AACGTTGTTAGGGGATAGGT

Downstream 100 bases:

>100_bases
GTCGTCGAGCGATCGACGCGCATTTAAGCAAGGACAAAGGACTCTCACGTGGCGGCTGCTGAATTTGACGTTCCGGAACT
GAAGGACGACATCGAAGTTC

Product: putative DsrM protein

Products: nitrate; reduced acceptor

Alternate protein names: Hme subunit C [H]

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSTVTIIYAGMFYIATLLLVAGLVYKIFDYSRTPAPLKIPTTPAPTTQKGVIYRMAKEVVLFESLFKSNKWIWVFGWLFH
FGLLLVLLRHLRYFTQPVWFWVDILQPFGKYASIMMVIGLGGLLARRFLVDRVRYISTPSDYLMLVLLLAIGLSGMMMTF
VTHTDIIALKGFFLGLMYLDIQPLPQDPALLVHLALVALLMVIFPISKLLHAPGLFFSPTRNQADNPRERRHVAAWAARL
DQGN

Sequences:

>Translated_244_residues
MSTVTIIYAGMFYIATLLLVAGLVYKIFDYSRTPAPLKIPTTPAPTTQKGVIYRMAKEVVLFESLFKSNKWIWVFGWLFH
FGLLLVLLRHLRYFTQPVWFWVDILQPFGKYASIMMVIGLGGLLARRFLVDRVRYISTPSDYLMLVLLLAIGLSGMMMTF
VTHTDIIALKGFFLGLMYLDIQPLPQDPALLVHLALVALLMVIFPISKLLHAPGLFFSPTRNQADNPRERRHVAAWAARL
DQGN
>Mature_243_residues
STVTIIYAGMFYIATLLLVAGLVYKIFDYSRTPAPLKIPTTPAPTTQKGVIYRMAKEVVLFESLFKSNKWIWVFGWLFHF
GLLLVLLRHLRYFTQPVWFWVDILQPFGKYASIMMVIGLGGLLARRFLVDRVRYISTPSDYLMLVLLLAIGLSGMMMTFV
THTDIIALKGFFLGLMYLDIQPLPQDPALLVHLALVALLMVIFPISKLLHAPGLFFSPTRNQADNPRERRHVAAWAARLD
QGN

Specific function: Has menaquinol-oxidizing activity. HmeC and hmeD subunits may together mediate electron transfer from menaquinol to an unidentified electron acceptor on the cytoplasmic side of the membrane [H]

COG id: COG2181

COG function: function code C; Nitrate reductase gamma subunit

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003816 [H]

Pfam domain/function: PF02665 Nitrate_red_gam [H]

EC number: 1.7.99.4

Molecular weight: Translated: 27779; Mature: 27648

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure 
STVTIIYAGMFYIATLLLVAGLVYKIFDYSRTPAPLKIPTTPAPTTQKGVIYRMAKEVV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHHHHHHHHH
LFESLFKSNKWIWVFGWLFHFGLLLVLLRHLRYFTQPVWFWVDILQPFGKYASIMMVIGL
HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GGLLARRFLVDRVRYISTPSDYLMLVLLLAIGLSGMMMTFVTHTDIIALKGFFLGLMYLD
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
IQPLPQDPALLVHLALVALLMVIFPISKLLHAPGLFFSPTRNQADNPRERRHVAAWAARL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHH
DQGN
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: nitrite; acceptor

Specific reaction: nitrite + acceptor = nitrate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475; 11952791 [H]