Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318494

Identifier: 74318494

GI number: 74318494

Start: 2552108

End: 2552611

Strand: Reverse

Name: 74318494

Synonym: Tbd_2476

Alternate gene names: NA

Gene position: 2552611-2552108 (Counterclockwise)

Preceding gene: 74318495

Following gene: 74318493

Centisome position: 87.72

GC content: 61.71

Gene sequence:

>504_bases
GTGACGCCCAAGTTCAAACGTCTGCTGGCATTGGGTGCGGCCGTCATGACGACGGCGGCCCTTGCCTGGGCCGGGAGCGA
CGCCGGCAGCCCGACCAAGGTCGCGGGCGCACCGAAGCCGGTGATCACCAAGGCCGTCAAGGGCGAGCAATGTGTCGAGG
ATACCGACATCATGCGCCGCGACCACATGAAGTTTCTGAACCATCATCGTGACGAAACCGTGGTCGAGGGCATCCGCACC
AAGAAGTACAGCCTGAAAGAGTGCATCAACTGCCACGCCAGCGAAAAGACCGGTAGCGTCGCGGCCGCGAAGGACGACTT
CTGCGTCAGCTGCCACAGCTACGCTGCCGTGAAGATCGATTGCTTCGAATGCCATTCGACCAAGCCGCAAGGTTCGGTGG
CACAGCATGCGCTGAACGCGGAAACCGCGCATTACAGGCACAAGCTGGCGGCCCAGGCCAACAGCAAGGTGAGCGCAGAA
GAGATGGCCGGGATTGTCCAATGA

Upstream 100 bases:

>100_bases
GCCGTTACGTCGATACCGACTACGGCAAGTGCATCGGCTGCCACATCTGTGCCGACGTCTGCCCGACCGGCTACATCGTC
ATGGGGATGGGTGACTGAGC

Downstream 100 bases:

>100_bases
GCGAATTGAAACCGATGTCTGACAACACGCCCGAGTCGGCGGAGCGCCGCCGGGTGATCGGCGGGCTCGCCGCCGCCGCG
GCCGGTCTTGCCATCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MTPKFKRLLALGAAVMTTAALAWAGSDAGSPTKVAGAPKPVITKAVKGEQCVEDTDIMRRDHMKFLNHHRDETVVEGIRT
KKYSLKECINCHASEKTGSVAAAKDDFCVSCHSYAAVKIDCFECHSTKPQGSVAQHALNAETAHYRHKLAAQANSKVSAE
EMAGIVQ

Sequences:

>Translated_167_residues
MTPKFKRLLALGAAVMTTAALAWAGSDAGSPTKVAGAPKPVITKAVKGEQCVEDTDIMRRDHMKFLNHHRDETVVEGIRT
KKYSLKECINCHASEKTGSVAAAKDDFCVSCHSYAAVKIDCFECHSTKPQGSVAQHALNAETAHYRHKLAAQANSKVSAE
EMAGIVQ
>Mature_166_residues
TPKFKRLLALGAAVMTTAALAWAGSDAGSPTKVAGAPKPVITKAVKGEQCVEDTDIMRRDHMKFLNHHRDETVVEGIRTK
KYSLKECINCHASEKTGSVAAAKDDFCVSCHSYAAVKIDCFECHSTKPQGSVAQHALNAETAHYRHKLAAQANSKVSAEE
MAGIVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17982; Mature: 17850

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKFKRLLALGAAVMTTAALAWAGSDAGSPTKVAGAPKPVITKAVKGEQCVEDTDIMRR
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
DHMKFLNHHRDETVVEGIRTKKYSLKECINCHASEKTGSVAAAKDDFCVSCHSYAAVKID
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEE
CFECHSTKPQGSVAQHALNAETAHYRHKLAAQANSKVSAEEMAGIVQ
EEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure 
TPKFKRLLALGAAVMTTAALAWAGSDAGSPTKVAGAPKPVITKAVKGEQCVEDTDIMRR
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
DHMKFLNHHRDETVVEGIRTKKYSLKECINCHASEKTGSVAAAKDDFCVSCHSYAAVKID
HHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCCCCEEECCCCEEEEEE
CFECHSTKPQGSVAQHALNAETAHYRHKLAAQANSKVSAEEMAGIVQ
EEECCCCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA