| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318468
Identifier: 74318468
GI number: 74318468
Start: 2520410
End: 2521186
Strand: Reverse
Name: 74318468
Synonym: Tbd_2450
Alternate gene names: NA
Gene position: 2521186-2520410 (Counterclockwise)
Preceding gene: 74318469
Following gene: 74318466
Centisome position: 86.64
GC content: 68.34
Gene sequence:
>777_bases ATGAACACGCCAAGCAGTCAGGACATTCCCCGCCGCGTCGCGGCCGCCGAGGGTTTTCGGTGGGTCGCCGCGGGCTTTCG CCTTTATCGCAAGAATCCGCTCCTGCTCTCCGCCGCGTTCGGCGTGCTGTTCGGCGTCGTCATGGCGCTGGGCCTCATCC CGGTGATCGGCGGCTCGCTTTCCGAACTCGCGTCGCCGCTCATGGTGGCGGGTTTCATGGCTGCGTATCGCGCGCTCGAC GAAGGGCGCGAGCTGGAACTGCCGCAATTTCTCGCCGGCGTGCGCGGGCCCGCGATCCCGCTGGCGACGGTCGGCGCCGT GCAACTGCTAGGCACGCTGGCGATCGGCCAGGTCATGCTCGCGATGGGATTCGATCCGCAGGCGCTGATGGCCGCCGCGC AGTCGCAGAAGGACCCTCAGGAAATGCAGGCCGTGCTCGATCAGTCGATGCCCGCCATGCTCACGGGCCTGCTGCTGTTT CTGCCCCTGATCATGGCGACCTGGTTCGCGCCGGCGCTGATCCTGTTCGGCGGCGCGCGGCCGTTGACGGCGCTCGGCGT GAGCTTCAAGGCGGTGGGGCGCAACCTCGCTGCGATGATGCTCAACGGCCTGGCACTCGGTGCGGTGCTCTTCGTTGCGG CGCTCGTGCCCCTGATGCTGGGCCTGCTGGTCGCGATGCCGGTGCTGTTCGGCTCGCTCTATGCGTCGTATCAGGCGATC TTCGCGGTGTGGGCGGATGACGCGACGCCGGCTCAGGCCGGCGACAGCTTGGCGTAG
Upstream 100 bases:
>100_bases ACGAGACGTCCGTTCCGGGCCGCGCCGGCTCAGCCCACGCCGCACTCGCTTCGCGCCTCGGGCTGCTGCCCGGCCGCAAG CCTCCATTACAATCCGTCGC
Downstream 100 bases:
>100_bases GCGAGCGCAAGCCACTTCGTTCCATCACGGAACTTGACCTGCACGCGCGCGTCGGGCCCGCGTCCTTCGAAGTCGATGAT GATGCCGGTGCCGAACCTGG
Product: transmembrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI FAVWADDATPAQAGDSLA
Sequences:
>Translated_258_residues MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI FAVWADDATPAQAGDSLA >Mature_258_residues MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSLSELASPLMVAGFMAAYRALD EGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVMLAMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLF LPLIMATWFAPALILFGGARPLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI FAVWADDATPAQAGDSLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26860; Mature: 26860
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSL CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH SELASPLMVAGFMAAYRALDEGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVML HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLFLPLIMATWFAPALILFGGAR HHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVWADDATPAQAGDSLA HHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNTPSSQDIPRRVAAAEGFRWVAAGFRLYRKNPLLLSAAFGVLFGVVMALGLIPVIGGSL CCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH SELASPLMVAGFMAAYRALDEGRELELPQFLAGVRGPAIPLATVGAVQLLGTLAIGQVML HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH AMGFDPQALMAAAQSQKDPQEMQAVLDQSMPAMLTGLLLFLPLIMATWFAPALILFGGAR HHCCCHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLTALGVSFKAVGRNLAAMMLNGLALGAVLFVAALVPLMLGLLVAMPVLFGSLYASYQAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAVWADDATPAQAGDSLA HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA