| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318421
Identifier: 74318421
GI number: 74318421
Start: 2475367
End: 2475837
Strand: Direct
Name: 74318421
Synonym: Tbd_2403
Alternate gene names: NA
Gene position: 2475367-2475837 (Clockwise)
Preceding gene: 74318420
Following gene: 74318422
Centisome position: 85.07
GC content: 69.0
Gene sequence:
>471_bases TTGAGCGGGATCCCGAATTTGCGAATACCGCGCCCCGCGCCGCTTTTCCTGGGCAGCCTGTTGCTGCTCGGCAACCCGGC CGCGAATGCCCTCGACTTTCGCACCACGAGCCGACCGGCGCTGCTGTACACCGCGCCGTCGAACACGGCCGGCAAGGTCG CGATCGCCGGCAGCGGGTTGCCACTCGAAGTCGTCGTCGACACCGAAAACTGGGCCAAGGTCCGCGATCACAGCGGGCGC CTCGCATGGATCGAGAAAGCGGCGCTGGGTGGCAGCAGAAACGTCGTCGTCAAGGCCGAGACGAGCCTTGTCCGCACGCA GCCGCGGCCCGACGCGGAAGTCGCGTTTCGCGTCGCGCGCGGCGTGCTGCTCGGGGTGACCGGCGAACCCGACGCCTACG GCTGGCTGCCCGTCAAGCACGCCGACGGCATGGCCGGTTGGCTGCCCTTGCACGAGGTCTGGGGTCGATGA
Upstream 100 bases:
>100_bases CGGGCTTCCCGCCTCTGCTCCTGAACCCGGTCAACTTCGAAGCCATTTTCGTGCAGCAACAGCAGGCCCAGCAGCAACAG GCGGGCGCCGCGCAGACGCA
Downstream 100 bases:
>100_bases AGCTCACCGTACTCGGCGCCGGCGCGTGGGGAACGGCGCTGGCCGCGAGCTGGGCGTCGCAGCATGCGGTGACGCTGTGG GGGCGCAATGCACGCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MSGIPNLRIPRPAPLFLGSLLLLGNPAANALDFRTTSRPALLYTAPSNTAGKVAIAGSGLPLEVVVDTENWAKVRDHSGR LAWIEKAALGGSRNVVVKAETSLVRTQPRPDAEVAFRVARGVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWGR
Sequences:
>Translated_156_residues MSGIPNLRIPRPAPLFLGSLLLLGNPAANALDFRTTSRPALLYTAPSNTAGKVAIAGSGLPLEVVVDTENWAKVRDHSGR LAWIEKAALGGSRNVVVKAETSLVRTQPRPDAEVAFRVARGVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWGR >Mature_155_residues SGIPNLRIPRPAPLFLGSLLLLGNPAANALDFRTTSRPALLYTAPSNTAGKVAIAGSGLPLEVVVDTENWAKVRDHSGRL AWIEKAALGGSRNVVVKAETSLVRTQPRPDAEVAFRVARGVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWGR
Specific function: Unknown
COG id: COG3807
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16618; Mature: 16487
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGIPNLRIPRPAPLFLGSLLLLGNPAANALDFRTTSRPALLYTAPSNTAGKVAIAGSGL CCCCCCCCCCCCCHHHHHEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCC PLEVVVDTENWAKVRDHSGRLAWIEKAALGGSRNVVVKAETSLVRTQPRPDAEVAFRVAR EEEEEEECCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEECCCCCCHHHHHHHHC GVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWGR CEEEEECCCCCCCCEEEEECCCCCCCCEEHHHHHCC >Mature Secondary Structure SGIPNLRIPRPAPLFLGSLLLLGNPAANALDFRTTSRPALLYTAPSNTAGKVAIAGSGL CCCCCCCCCCCCHHHHHEEEEECCCCCCEEEEECCCCCEEEEECCCCCCCEEEEECCCC PLEVVVDTENWAKVRDHSGRLAWIEKAALGGSRNVVVKAETSLVRTQPRPDAEVAFRVAR EEEEEEECCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCEEEECCCCCCHHHHHHHHC GVLLGVTGEPDAYGWLPVKHADGMAGWLPLHEVWGR CEEEEECCCCCCCCEEEEECCCCCCCCEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA