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The map label for this gene is slmA [H]

Identifier: 74318407

GI number: 74318407

Start: 2462160

End: 2462774

Strand: Direct

Name: slmA [H]

Synonym: Tbd_2389

Alternate gene names: 74318407

Gene position: 2462160-2462774 (Clockwise)

Preceding gene: 74318406

Following gene: 74318413

Centisome position: 84.62

GC content: 62.44

Gene sequence:

>615_bases
ATGGAAGGGGAAGTCAGAAGAAACGGCGAGCGACGTCTGCAGATCCTGCAGGCGCTCGCGACGATGCTTCAGGAACCACA
GCCGGAGAAAATCACCACGGCGGCACTCGCCGCGCGGGTCGGAGTGTCGGAAGCTGCACTCTATCGTCATTTTTCCAGCA
AGGCGCAAATGTACGAAGGGCTGATCGAATTCATCGAGCAGACGCTTTTCGGCCTGATCGCGCGCATCGTTGCCGACACG
CATTCGCCGCCTGCCCAGGTCGAAGCCATCCTCGTCACGCTCCTGAGCTTCGCGACGAAAAATCCCGGGATGACACGCGT
GCTGATCGGCGAGGCGCTGGTCCACGAAAACACGCGCCTGCAAAAGCGCATCAATCAACTGCAGGACCGGATCGAAGCGC
AGTTACGGCAGTGCCTGCGTCTCGGCGGCGACAGGCTGGCGAATGCGAGCGCACCGCTCGCCAATCTGCTGCTCTGTCTG
GTCGTGGGTCGTTGGCACCAATACGCGAAGAGCGGCTTCACGCGCGGCCCCGAGGGCGACGTCGCGTTCATGCTGTCACA
CCTGCTCGCAGACGCCGCGTCTACAGGTTCAGCGCGAGCGACAGACCGGGCATAG

Upstream 100 bases:

>100_bases
CAGGGGACTCATAATCCCTTGGTCCACGGTTCAAGTCCGTGCAGACCCACCATTCACCCGGCATCGGCGATAATCACCCC
GATAAAAAAGGGGGTAGCGG

Downstream 100 bases:

>100_bases
GGGATCGCGGCGCAGTTTCATGACGCGGGCGTCGCTGCGCAAGCCGTCCCACAACAGCAGCCGGCCGACAAGAGGGTCGC
CGACGCCGGCCAACAACTTC

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRHFSSKAQMYEGLIEFIEQTLFGLIARIVADT
HSPPAQVEAILVTLLSFATKNPGMTRVLIGEALVHENTRLQKRINQLQDRIEAQLRQCLRLGGDRLANASAPLANLLLCL
VVGRWHQYAKSGFTRGPEGDVAFMLSHLLADAASTGSARATDRA

Sequences:

>Translated_204_residues
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRHFSSKAQMYEGLIEFIEQTLFGLIARIVADT
HSPPAQVEAILVTLLSFATKNPGMTRVLIGEALVHENTRLQKRINQLQDRIEAQLRQCLRLGGDRLANASAPLANLLLCL
VVGRWHQYAKSGFTRGPEGDVAFMLSHLLADAASTGSARATDRA
>Mature_204_residues
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRHFSSKAQMYEGLIEFIEQTLFGLIARIVADT
HSPPAQVEAILVTLLSFATKNPGMTRVLIGEALVHENTRLQKRINQLQDRIEAQLRQCLRLGGDRLANASAPLANLLLCL
VVGRWHQYAKSGFTRGPEGDVAFMLSHLLADAASTGSARATDRA

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=181, Percent_Identity=46.9613259668508, Blast_Score=137, Evalue=6e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22369; Mature: 22369

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRHFSSKAQMYEG
CCCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LIEFIEQTLFGLIARIVADTHSPPAQVEAILVTLLSFATKNPGMTRVLIGEALVHENTRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QKRINQLQDRIEAQLRQCLRLGGDRLANASAPLANLLLCLVVGRWHQYAKSGFTRGPEGD
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VAFMLSHLLADAASTGSARATDRA
HHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MEGEVRRNGERRLQILQALATMLQEPQPEKITTAALAARVGVSEAALYRHFSSKAQMYEG
CCCCHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LIEFIEQTLFGLIARIVADTHSPPAQVEAILVTLLSFATKNPGMTRVLIGEALVHENTRL
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
QKRINQLQDRIEAQLRQCLRLGGDRLANASAPLANLLLCLVVGRWHQYAKSGFTRGPEGD
HHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VAFMLSHLLADAASTGSARATDRA
HHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA