Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is plsY

Identifier: 74318400

GI number: 74318400

Start: 2454973

End: 2455575

Strand: Direct

Name: plsY

Synonym: Tbd_2382

Alternate gene names: 74318400

Gene position: 2454973-2455575 (Clockwise)

Preceding gene: 74318396

Following gene: 74318401

Centisome position: 84.37

GC content: 67.83

Gene sequence:

>603_bases
ATGATCCACCTGTTGCTCGTTGTCGCCGCGTACCTGCTCGGCTCGCTGTCGTTTGCGGTGATCGTCAGCCGCGCGATGGG
ACTGCCTGATCCGCGCAGCTTCGGCTCCGGCAACCCGGGCGCGACCAACGTGCTGCGTACGGGACGCAAGACCGCGGCGA
TCCTCACACTTCTCGGCGACGCCCTCAAGGGATGGGTCGCGGTCGTCGCGGCGCGCGGGCTGGCCGCGCAGTTCGGACTC
GACGACGACATCGTCCTGCTCTGCGCTCTCGCCGCGTTCATCGGCCACCTGTTCCCGGTGTTCTTCGGCTTCCAGGGCGG
CAAGGGCGTCGCCACCGCGCTCGGCATCCTCGTCGCGCTCGATCCCTGGCTGGGCCTGGCGTGTCTGGCGACTTGGGTCG
CGATGGCGCTGGTGTTTCGCATTTCGTCGCTCTCGGCGCTCGTCACGGCCGTGCTGGCGCCGGTCTACGCCGGCCTCTTG
CTGGGTTGGAACGACAGCGCGACGACCGTGCTGGTGATCGCCCTGCTGCTGGTCTATCGTCACAAGGCGAACCTCCTCAA
ACTCGTTACCGGCCAGGAAGCGCGCATCGGCAAGCGCTCCTGA

Upstream 100 bases:

>100_bases
TCAGATCGAGACGGAAGTCCCGCAAAAATAAGATATCCATCGCCTCGAACCTCACGGGCGCCACTCGGCGCGCTTGCCAA
ACCCGCTATCTTACTGACTT

Downstream 100 bases:

>100_bases
TCACTGTCTGCCATGGCCCTGTTCGACAAAACCATCGATCACGCGAAAGAGAGCCTTGCGGAGGTTTCGCGCGAGGCCAT
CGACCAGGCCGGAAAGCGCC

Product: acyl-phosphate glycerol-3-phosphate acyltransferase

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL
DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL
LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS

Sequences:

>Translated_200_residues
MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL
DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL
LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS
>Mature_200_residues
MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL
DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL
LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family

Homologues:

Organism=Escherichia coli, GI1789439, Length=193, Percent_Identity=43.5233160621762, Blast_Score=134, Evalue=6e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PLSY_THIDA (Q3SGB5)

Other databases:

- EMBL:   CP000116
- RefSeq:   YP_316140.1
- STRING:   Q3SGB5
- GeneID:   3673549
- GenomeReviews:   CP000116_GR
- KEGG:   tbd:Tbd_2382
- NMPDR:   fig|292415.3.peg.2455
- eggNOG:   COG0344
- HOGENOM:   HBG734487
- OMA:   SRIGEKK
- PhylomeDB:   Q3SGB5
- BioCyc:   TDEN292415:TBD_2382-MONOMER
- HAMAP:   MF_01043
- InterPro:   IPR003811
- TIGRFAMs:   TIGR00023

Pfam domain/function: PF02660 DUF205

EC number: NA

Molecular weight: Translated: 20805; Mature: 20805

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1d8a84a4)-; HASH(0x1e087c24)-; HASH(0x1e0dd754)-; HASH(0x1e47352c)-; HASH(0x1dad5394)-;

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGD
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
ALKGWVAVVAARGLAAQFGLDDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLLLGWNDSATTVLVIALLLVYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HKANLLKLVTGQEARIGKRS
HHHHHHHHHCCCCCCCCCCH
>Mature Secondary Structure
MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGD
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH
ALKGWVAVVAARGLAAQFGLDDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVAL
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLLLGWNDSATTVLVIALLLVYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HKANLLKLVTGQEARIGKRS
HHHHHHHHHCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA