| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is plsY
Identifier: 74318400
GI number: 74318400
Start: 2454973
End: 2455575
Strand: Direct
Name: plsY
Synonym: Tbd_2382
Alternate gene names: 74318400
Gene position: 2454973-2455575 (Clockwise)
Preceding gene: 74318396
Following gene: 74318401
Centisome position: 84.37
GC content: 67.83
Gene sequence:
>603_bases ATGATCCACCTGTTGCTCGTTGTCGCCGCGTACCTGCTCGGCTCGCTGTCGTTTGCGGTGATCGTCAGCCGCGCGATGGG ACTGCCTGATCCGCGCAGCTTCGGCTCCGGCAACCCGGGCGCGACCAACGTGCTGCGTACGGGACGCAAGACCGCGGCGA TCCTCACACTTCTCGGCGACGCCCTCAAGGGATGGGTCGCGGTCGTCGCGGCGCGCGGGCTGGCCGCGCAGTTCGGACTC GACGACGACATCGTCCTGCTCTGCGCTCTCGCCGCGTTCATCGGCCACCTGTTCCCGGTGTTCTTCGGCTTCCAGGGCGG CAAGGGCGTCGCCACCGCGCTCGGCATCCTCGTCGCGCTCGATCCCTGGCTGGGCCTGGCGTGTCTGGCGACTTGGGTCG CGATGGCGCTGGTGTTTCGCATTTCGTCGCTCTCGGCGCTCGTCACGGCCGTGCTGGCGCCGGTCTACGCCGGCCTCTTG CTGGGTTGGAACGACAGCGCGACGACCGTGCTGGTGATCGCCCTGCTGCTGGTCTATCGTCACAAGGCGAACCTCCTCAA ACTCGTTACCGGCCAGGAAGCGCGCATCGGCAAGCGCTCCTGA
Upstream 100 bases:
>100_bases TCAGATCGAGACGGAAGTCCCGCAAAAATAAGATATCCATCGCCTCGAACCTCACGGGCGCCACTCGGCGCGCTTGCCAA ACCCGCTATCTTACTGACTT
Downstream 100 bases:
>100_bases TCACTGTCTGCCATGGCCCTGTTCGACAAAACCATCGATCACGCGAAAGAGAGCCTTGCGGAGGTTTCGCGCGAGGCCAT CGACCAGGCCGGAAAGCGCC
Product: acyl-phosphate glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS
Sequences:
>Translated_200_residues MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS >Mature_200_residues MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGDALKGWVAVVAARGLAAQFGL DDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVALDPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLL LGWNDSATTVLVIALLLVYRHKANLLKLVTGQEARIGKRS
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=193, Percent_Identity=43.5233160621762, Blast_Score=134, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_THIDA (Q3SGB5)
Other databases:
- EMBL: CP000116 - RefSeq: YP_316140.1 - STRING: Q3SGB5 - GeneID: 3673549 - GenomeReviews: CP000116_GR - KEGG: tbd:Tbd_2382 - NMPDR: fig|292415.3.peg.2455 - eggNOG: COG0344 - HOGENOM: HBG734487 - OMA: SRIGEKK - PhylomeDB: Q3SGB5 - BioCyc: TDEN292415:TBD_2382-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 20805; Mature: 20805
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1d8a84a4)-; HASH(0x1e087c24)-; HASH(0x1e0dd754)-; HASH(0x1e47352c)-; HASH(0x1dad5394)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH ALKGWVAVVAARGLAAQFGLDDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLLLGWNDSATTVLVIALLLVYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HKANLLKLVTGQEARIGKRS HHHHHHHHHCCCCCCCCCCH >Mature Secondary Structure MIHLLLVVAAYLLGSLSFAVIVSRAMGLPDPRSFGSGNPGATNVLRTGRKTAAILTLLGD CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHH ALKGWVAVVAARGLAAQFGLDDDIVLLCALAAFIGHLFPVFFGFQGGKGVATALGILVAL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH DPWLGLACLATWVAMALVFRISSLSALVTAVLAPVYAGLLLGWNDSATTVLVIALLLVYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH HKANLLKLVTGQEARIGKRS HHHHHHHHHCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA