| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is fpr [H]
Identifier: 74318376
GI number: 74318376
Start: 2430992
End: 2431738
Strand: Reverse
Name: fpr [H]
Synonym: Tbd_2358
Alternate gene names: 74318376
Gene position: 2431738-2430992 (Counterclockwise)
Preceding gene: 74318377
Following gene: 74318372
Centisome position: 83.57
GC content: 64.39
Gene sequence:
>747_bases ATGCCCTATAGCGAACAAACCGTACAGTGGGTGCGGCCGTGGTCCGACAAGACGTTCAGCTTCACGGTGACGCGTCCGCA GGATTTCTCGTTCGCGAACGGCGAGTTCGTCACGATCGGACTCAAGCAGGAAGGCAAGCTCGTGGCGCGTGCCTATTCGA TCGTCTCGACGGCCGACCGCGACTATCTCGAGTTCCTGAGCATCCATGTCCCGGACGGGCCGCTGACGAGTCAGCTTTCA CAGATCAAGCCGGGCGACCGGGTCTGGATCAACAACAAGACGACGGGAACGCTGACGCTCGACCACGTGTCGCCGGGGCG CGTCCTTTACATGCTCGCCACCGGCACCGGGGTCGCGCCCTTCGTGAGCCTCGTGCGCGATCCCGCGATCTTCGCGCGCT TCGAAACGGTCGTGCTCGTGCATTCGGTTCGGACGGCCGCCGAACTCGCGTATCGCGAGGAACTCGAGGCCATGGACCAG CCACAACTGCACTACGTGCCGACGGTGACCCGCGAGCCGTTTCCGACGACCGAGCGCGGCAGCGAACTTTTTCGCTCGGG CCTGCTGTCGCAGCGCCTGGGTTTACCGCCGCCCGACCCCGAGCAGGACCGCGTGATGATCTGCGGCAACCCGCAGATGA CGCGCGAAATGACGCGCTTTCTCAAGGACACCGGCTGGACGCTGACGACCCCGCGCGGGCTCGGCAATTTCACGACAGAA GTCGCCTTCGTCCTGCATCACGGCTGA
Upstream 100 bases:
>100_bases GGCTCAGGCCGCTCGTCTGCATCAAGGGCTGACCGCAGGGCCGGAACTGTCGTCGCGCCCGGGCGTCGAAAAAGCGTCTA TCCAGCATGGAGCAACCGCG
Downstream 100 bases:
>100_bases ACAGGAGCCGCGCCTCAGCCGTGCCGATGGTGCTTGTGGTGCCGATGTTTGCCGTGGCCGCGGTCGTAGTGGTGGTGGCG GTCGCCGCCCTCGCGCCAGT
Product: ferredoxin-NADP reductase
Products: NA
Alternate protein names: FNR; Protein X [H]
Number of amino acids: Translated: 248; Mature: 247
Protein sequence:
>248_residues MPYSEQTVQWVRPWSDKTFSFTVTRPQDFSFANGEFVTIGLKQEGKLVARAYSIVSTADRDYLEFLSIHVPDGPLTSQLS QIKPGDRVWINNKTTGTLTLDHVSPGRVLYMLATGTGVAPFVSLVRDPAIFARFETVVLVHSVRTAAELAYREELEAMDQ PQLHYVPTVTREPFPTTERGSELFRSGLLSQRLGLPPPDPEQDRVMICGNPQMTREMTRFLKDTGWTLTTPRGLGNFTTE VAFVLHHG
Sequences:
>Translated_248_residues MPYSEQTVQWVRPWSDKTFSFTVTRPQDFSFANGEFVTIGLKQEGKLVARAYSIVSTADRDYLEFLSIHVPDGPLTSQLS QIKPGDRVWINNKTTGTLTLDHVSPGRVLYMLATGTGVAPFVSLVRDPAIFARFETVVLVHSVRTAAELAYREELEAMDQ PQLHYVPTVTREPFPTTERGSELFRSGLLSQRLGLPPPDPEQDRVMICGNPQMTREMTRFLKDTGWTLTTPRGLGNFTTE VAFVLHHG >Mature_247_residues PYSEQTVQWVRPWSDKTFSFTVTRPQDFSFANGEFVTIGLKQEGKLVARAYSIVSTADRDYLEFLSIHVPDGPLTSQLSQ IKPGDRVWINNKTTGTLTLDHVSPGRVLYMLATGTGVAPFVSLVRDPAIFARFETVVLVHSVRTAAELAYREELEAMDQP QLHYVPTVTREPFPTTERGSELFRSGLLSQRLGLPPPDPEQDRVMICGNPQMTREMTRFLKDTGWTLTTPRGLGNFTTEV AFVLHHG
Specific function: Transports Electrons Between Flavodoxin Or Ferredoxin And NADPH. Involved In The Reductive Activation Of Cobalamin- Independent Methionine Synthase, Pyruvate Formate Lyase And Anaerobic Ribonucleotide Reductase. Also Protects Against Superoxide Radicals
COG id: COG1018
COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding FR-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790359, Length=219, Percent_Identity=40.1826484018265, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017927 - InterPro: IPR001709 - InterPro: IPR008333 - InterPro: IPR001433 - InterPro: IPR017938 [H]
Pfam domain/function: PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]
EC number: =1.18.1.2 [H]
Molecular weight: Translated: 27858; Mature: 27727
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYSEQTVQWVRPWSDKTFSFTVTRPQDFSFANGEFVTIGLKQEGKLVARAYSIVSTADR CCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCH DYLEFLSIHVPDGPLTSQLSQIKPGDRVWINNKTTGTLTLDHVSPGRVLYMLATGTGVAP HHHEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHH FVSLVRDPAIFARFETVVLVHSVRTAAELAYREELEAMDQPQLHYVPTVTREPFPTTERG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHH SELFRSGLLSQRLGLPPPDPEQDRVMICGNPQMTREMTRFLKDTGWTLTTPRGLGNFTTE HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCHHHE VAFVLHHG EEEEEECC >Mature Secondary Structure PYSEQTVQWVRPWSDKTFSFTVTRPQDFSFANGEFVTIGLKQEGKLVARAYSIVSTADR CCCCCHHHHCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCH DYLEFLSIHVPDGPLTSQLSQIKPGDRVWINNKTTGTLTLDHVSPGRVLYMLATGTGVAP HHHEEEEEECCCCCHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCEEEEEEECCCCHHH FVSLVRDPAIFARFETVVLVHSVRTAAELAYREELEAMDQPQLHYVPTVTREPFPTTERG HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHH SELFRSGLLSQRLGLPPPDPEQDRVMICGNPQMTREMTRFLKDTGWTLTTPRGLGNFTTE HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEECCCCCCCHHHE VAFVLHHG EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7673160; 8034707; 9865948 [H]