| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318360
Identifier: 74318360
GI number: 74318360
Start: 2416989
End: 2417585
Strand: Direct
Name: 74318360
Synonym: Tbd_2342
Alternate gene names: NA
Gene position: 2416989-2417585 (Clockwise)
Preceding gene: 74318359
Following gene: 74318370
Centisome position: 83.06
GC content: 63.65
Gene sequence:
>597_bases ATGATCGAAACCCAAGCCCACTTCGACCAGGCCATGGCCTTGTTCGACACGGCCAATGCCGAAGATCCCAACCAGCAGGA CGGCCAGCCCAAGGAACTGCTCTATTCGCAGCGCATGTCGGACATGCTCGCGCGTTTCGCCCCCGACGCGTCGGAAGCGG CGCAGCTCGCCGTGCGCGCGCAGCACATCCGGCGCTGGACCGTTCCGCGCAACAGCTATCCGATGACCAAGGAGGGCTAT CACGCCTGGCGCACCGGCCTCTACAAGTTCCACGCCGACACGGCCGGCGATCTGATGCGCCAGGCCGGCTACGACGAGGC GATGATCGAGCGCGTGAAGAAAGCCGTCGGCAAGCGCGGCATCAAGGTCAACGCCGAATCGCAGCTCCTCGAGGACATCG CCAACCTGGTCTTCATCGAGCATTACATGCTCGACTTCGCGCAGAGCAAGCCCGAGTACGACGAAGCGAAGTGGATCGAC ATCATCCGCCGCACCTGGAGCAAGATGTCGAAGGACGCGCAGGCCTTCGCGCTGGCCGGCAAGATCAAGCTCCCCGAGCC CCTGATCCCGCTGATCACCAAGGCGATCAGCGACTAG
Upstream 100 bases:
>100_bases GCACCGAAGACGGCCGTCGGCTCAACCGGCGCGTCGAATTGTGGATCCTGCCCGTGGTCTCGGGCTGACCCACCCCCCCA AACATCAGGAAAACCGGAAC
Downstream 100 bases:
>100_bases GGACGGCCCCTACTCCGCCCACTCCTTGACCCAGCCGGCCGTTCCCTTCTGGATGAACTCGATCGGATAGCCGTCGGGGT CCTCGACGAAGGCGATGACC
Product: hypothetical protein
Products: NA
Alternate protein names: Glutamate-TRNA Ligase
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MIETQAHFDQAMALFDTANAEDPNQQDGQPKELLYSQRMSDMLARFAPDASEAAQLAVRAQHIRRWTVPRNSYPMTKEGY HAWRTGLYKFHADTAGDLMRQAGYDEAMIERVKKAVGKRGIKVNAESQLLEDIANLVFIEHYMLDFAQSKPEYDEAKWID IIRRTWSKMSKDAQAFALAGKIKLPEPLIPLITKAISD
Sequences:
>Translated_198_residues MIETQAHFDQAMALFDTANAEDPNQQDGQPKELLYSQRMSDMLARFAPDASEAAQLAVRAQHIRRWTVPRNSYPMTKEGY HAWRTGLYKFHADTAGDLMRQAGYDEAMIERVKKAVGKRGIKVNAESQLLEDIANLVFIEHYMLDFAQSKPEYDEAKWID IIRRTWSKMSKDAQAFALAGKIKLPEPLIPLITKAISD >Mature_198_residues MIETQAHFDQAMALFDTANAEDPNQQDGQPKELLYSQRMSDMLARFAPDASEAAQLAVRAQHIRRWTVPRNSYPMTKEGY HAWRTGLYKFHADTAGDLMRQAGYDEAMIERVKKAVGKRGIKVNAESQLLEDIANLVFIEHYMLDFAQSKPEYDEAKWID IIRRTWSKMSKDAQAFALAGKIKLPEPLIPLITKAISD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22589; Mature: 22589
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETQAHFDQAMALFDTANAEDPNQQDGQPKELLYSQRMSDMLARFAPDASEAAQLAVRA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QHIRRWTVPRNSYPMTKEGYHAWRTGLYKFHADTAGDLMRQAGYDEAMIERVKKAVGKRG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC IKVNAESQLLEDIANLVFIEHYMLDFAQSKPEYDEAKWIDIIRRTWSKMSKDAQAFALAG CEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC KIKLPEPLIPLITKAISD CCCCCCCHHHHHHHHHCC >Mature Secondary Structure MIETQAHFDQAMALFDTANAEDPNQQDGQPKELLYSQRMSDMLARFAPDASEAAQLAVRA CCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH QHIRRWTVPRNSYPMTKEGYHAWRTGLYKFHADTAGDLMRQAGYDEAMIERVKKAVGKRG HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHCCCC IKVNAESQLLEDIANLVFIEHYMLDFAQSKPEYDEAKWIDIIRRTWSKMSKDAQAFALAG CEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC KIKLPEPLIPLITKAISD CCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA