| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318343
Identifier: 74318343
GI number: 74318343
Start: 2399686
End: 2400543
Strand: Reverse
Name: 74318343
Synonym: Tbd_2325
Alternate gene names: NA
Gene position: 2400543-2399686 (Counterclockwise)
Preceding gene: 74318344
Following gene: 74318341
Centisome position: 82.5
GC content: 65.38
Gene sequence:
>858_bases ATGAAGAATATCTACACGGTGCCCGAGGTGGTCAGCAAGAAGAAGGCAGGACTGCTGCGGGGCTGGCGCGGGCTGAAGAT CGGCTATACCGTCTCGGAACGCGAGCACTGGGTGTCCGCGGCCGGCGGCCTGCTTGGCATGCTGACCCTCTTGTGGGTGA GCCATATCTGGCTGTACGGACAGACGGGTGTGGTGCCGATCGCGTCGATGGGCGCTTCGGCGGTGCTGCTGTTCGCCGCC CCCCATGGCGCGCTATCGCAGCCGTGGTCGGTTTTCGGCGGCCATGTCGTCTCGGCCTTGATCGGCGTGGCCTGCGCCAA ATGGCTCGGCGCCGATCCGCTGCTCGCGGCCTCGCTCGCGGTCGCCCTGTCGATCGCCGCCATGTACAGCCTGCGCTGCC TGCATCCGCCCGGCGGCGCGACTGCGATGTACGCTGTCCTCGGCGGCGAGAGCGTGCACGCGCTGGGATATGGCTATGCG TTCGACCCGGTCGCGCTGAACGCGATCATCCTGATCCTGATGGCTGTGGCCTTCAACTATCCGTTCCCCTGGCGGCGGTA CCCCGAGGTCTGGTGGCGTCAAAAGACGGCGGAAACCGTGCAGACGCCCTCAACCGAAGAGAAATGCATGATTCCGCACA GCGACCTCGTCTACGCGTTGAGCCAGATCGACACCTTCGTCGACATCAGCGAAGCGGATCTGCAGCGGATCTACGCGCTC GCCCTGGGTCATCAACATCAGCAGGAAGCCGGAACGCCCTCGCAGGCGCAGGCCACCGAGTCCGCGCCGGGCGCGGCGGT GCGCGCGTCTAACCAAGCGCTGTGTCCAGCATCATCATCAACACAAAACCGCCGATGA
Upstream 100 bases:
>100_bases ACTCTTTCCGCTGGGATACGGCCAGCAGGCCTGCCGCATCGCCGGGATGCGCAAGCCTTTGAAACTGATGCTCGATGTGT AAAGCGGAGACCAGGACACG
Downstream 100 bases:
>100_bases GGCCGAGCGTCGCGGCCTGCTCGTGCCCCTTGCGATGGGTCTCGGGCACGATCTCGTGCGACACGACCCAGATCATCGCG CCGGCCGCAAAGCCCAGGCC
Product: CBS domain-containing protein
Products: NA
Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family; HPP Domain Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR
Sequences:
>Translated_285_residues MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR >Mature_285_residues MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR
Specific function: Unknown
COG id: COG3448
COG function: function code T; CBS-domain-containing membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30512; Mature: 30512
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYG CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTGVVPIASMGASAVLLFAAPHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLA CCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYAFDPVALNAIILILMAVAFNY HHHHHHHHHHHHEECCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC PFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR HHCCHHHHHCCCCCHHHHCCCCCCCEEECCCCEECCCCCCCCCCC >Mature Secondary Structure MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYG CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC QTGVVPIASMGASAVLLFAAPHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLA CCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH VALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYAFDPVALNAIILILMAVAFNY HHHHHHHHHHHHEECCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC PFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR HHCCHHHHHCCCCCHHHHCCCCCCCEEECCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA