Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is 74318343

Identifier: 74318343

GI number: 74318343

Start: 2399686

End: 2400543

Strand: Reverse

Name: 74318343

Synonym: Tbd_2325

Alternate gene names: NA

Gene position: 2400543-2399686 (Counterclockwise)

Preceding gene: 74318344

Following gene: 74318341

Centisome position: 82.5

GC content: 65.38

Gene sequence:

>858_bases
ATGAAGAATATCTACACGGTGCCCGAGGTGGTCAGCAAGAAGAAGGCAGGACTGCTGCGGGGCTGGCGCGGGCTGAAGAT
CGGCTATACCGTCTCGGAACGCGAGCACTGGGTGTCCGCGGCCGGCGGCCTGCTTGGCATGCTGACCCTCTTGTGGGTGA
GCCATATCTGGCTGTACGGACAGACGGGTGTGGTGCCGATCGCGTCGATGGGCGCTTCGGCGGTGCTGCTGTTCGCCGCC
CCCCATGGCGCGCTATCGCAGCCGTGGTCGGTTTTCGGCGGCCATGTCGTCTCGGCCTTGATCGGCGTGGCCTGCGCCAA
ATGGCTCGGCGCCGATCCGCTGCTCGCGGCCTCGCTCGCGGTCGCCCTGTCGATCGCCGCCATGTACAGCCTGCGCTGCC
TGCATCCGCCCGGCGGCGCGACTGCGATGTACGCTGTCCTCGGCGGCGAGAGCGTGCACGCGCTGGGATATGGCTATGCG
TTCGACCCGGTCGCGCTGAACGCGATCATCCTGATCCTGATGGCTGTGGCCTTCAACTATCCGTTCCCCTGGCGGCGGTA
CCCCGAGGTCTGGTGGCGTCAAAAGACGGCGGAAACCGTGCAGACGCCCTCAACCGAAGAGAAATGCATGATTCCGCACA
GCGACCTCGTCTACGCGTTGAGCCAGATCGACACCTTCGTCGACATCAGCGAAGCGGATCTGCAGCGGATCTACGCGCTC
GCCCTGGGTCATCAACATCAGCAGGAAGCCGGAACGCCCTCGCAGGCGCAGGCCACCGAGTCCGCGCCGGGCGCGGCGGT
GCGCGCGTCTAACCAAGCGCTGTGTCCAGCATCATCATCAACACAAAACCGCCGATGA

Upstream 100 bases:

>100_bases
ACTCTTTCCGCTGGGATACGGCCAGCAGGCCTGCCGCATCGCCGGGATGCGCAAGCCTTTGAAACTGATGCTCGATGTGT
AAAGCGGAGACCAGGACACG

Downstream 100 bases:

>100_bases
GGCCGAGCGTCGCGGCCTGCTCGTGCCCCTTGCGATGGGTCTCGGGCACGATCTCGTGCGACACGACCCAGATCATCGCG
CCGGCCGCAAAGCCCAGGCC

Product: CBS domain-containing protein

Products: NA

Alternate protein names: CBS Domain-Containing Protein; CBS Domain Containing Membrane Protein; HPP Family Protein+B; Cbs Domain Containing Membrane Protein; CBS Domain-Containing Membrane Protein; CbsHpp; HPP Domain-Containing Protein; HPP Family Membrane Protein; HPP Family/CBS Domain-Containing Protein; HPP Domain And CBS Domain Pair-Containing Protein; Transmembrane Protein; CBS Domain Pair Family; CBS-Domain-Containing Membrane Protein; Signal Transduction Protein; Conserved Protein; HPP Family; HPP Domain Protein

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA
PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA
FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL
ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR

Sequences:

>Translated_285_residues
MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA
PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA
FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL
ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR
>Mature_285_residues
MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYGQTGVVPIASMGASAVLLFAA
PHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLAVALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYA
FDPVALNAIILILMAVAFNYPFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL
ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR

Specific function: Unknown

COG id: COG3448

COG function: function code T; CBS-domain-containing membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30512; Mature: 30512

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYG
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTGVVPIASMGASAVLLFAAPHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLA
CCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYAFDPVALNAIILILMAVAFNY
HHHHHHHHHHHHEECCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR
HHCCHHHHHCCCCCHHHHCCCCCCCEEECCCCEECCCCCCCCCCC
>Mature Secondary Structure
MKNIYTVPEVVSKKKAGLLRGWRGLKIGYTVSEREHWVSAAGGLLGMLTLLWVSHIWLYG
CCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QTGVVPIASMGASAVLLFAAPHGALSQPWSVFGGHVVSALIGVACAKWLGADPLLAASLA
CCCCCCHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VALSIAAMYSLRCLHPPGGATAMYAVLGGESVHALGYGYAFDPVALNAIILILMAVAFNY
HHHHHHHHHHHHEECCCCCHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCC
PFPWRRYPEVWWRQKTAETVQTPSTEEKCMIPHSDLVYALSQIDTFVDISEADLQRIYAL
CCCCCCCCHHHHHHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALGHQHQQEAGTPSQAQATESAPGAAVRASNQALCPASSSTQNRR
HHCCHHHHHCCCCCHHHHCCCCCCCEEECCCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA