| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318302
Identifier: 74318302
GI number: 74318302
Start: 2357107
End: 2357955
Strand: Reverse
Name: 74318302
Synonym: Tbd_2284
Alternate gene names: NA
Gene position: 2357955-2357107 (Counterclockwise)
Preceding gene: 74318303
Following gene: 74318301
Centisome position: 81.03
GC content: 60.54
Gene sequence:
>849_bases ATGATCGACAGTAACCCCTTTGCCGAACTCGCCGCCTTCATCTCCCCGACTGCGATGCAGGCCTACGTCGTACTGATGGT TGTTCTTGTGGCGGTCGGGACGATACTCGACATGCTGCACAAGAAGAGCGGCCAATACTTTTTCGAGAATGCCAGGCGGG CCAAAAGAAACGCGACGCGCACGCTAAGTTCGGGCGAAAAAGGCGCACTGGCCTTGAAGACACTCGGCAAGGAGGTGCTG ACCTCGGGCGAATTCAACAATCCGAAGCGCCGCATTTCCCACCTCCTCACGATGTACGGCTTCATCATTTTCGTCGTCAC CACGGCGATCCTGATCTTTGCCTATCCGACCCCGGACGATCCTGCGCCAACCGTCGTGCCGCTGCTTTGGCACCTGGGCG CCGCCATGCTGGCCTTCGGGGGTTACTGGTTCTGGTTCAGCATCCGCGTCGACGTCGCCTCCGAAGGCGTCAAGTGGTAT CAGCTGAACGGGCGCGGCGACCTTTTCATCGTCGGCCTGCTAGGCATGGCGACTTTTGCGCTGCTCTGGTCGTTCACCCG GGACGTCGACACGCTGGGCACGCTGTTTTTCGTGCTCTTCGTCGCGTTCAGCACGCTGCTCTTCGGCTCGGTGTACTGGT CCAAGTTCGCCCACATGTTCTTCAAGCCCGCGGCCGCGTTCCAGAAGCGCGTCATCAAGGCCGACGGATCGAGGGAGAAC ATGCCCGCCGTCTACGATCCGTCGGATCCCGACGTGCAGGCGAGGTTTCCCGATGTCCCAGCCTACATGGGCCCCAACCC GCCCAACATGGGACTGGGCATCAAGCGCGAAGCGCCGAGCCATTTTTAA
Upstream 100 bases:
>100_bases GCGGTCCCATACACGAAATCGCCAAGCTATCCCCGCTGCATCTTCAAAGCTCGCACAGATGTCGTGTTCGTATTCCTGAG ATCGGAGGAGACCCGAGCCC
Downstream 100 bases:
>100_bases CGGGCTGAGCCACCCCCGAACCGAGCCCACAGAATCGAGAGGAGCCCCATGCCTACCTTTGTGTACATGACGCGTTGCGA CGGCTGCGGGTACTGCGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 282
Protein sequence:
>282_residues MIDSNPFAELAAFISPTAMQAYVVLMVVLVAVGTILDMLHKKSGQYFFENARRAKRNATRTLSSGEKGALALKTLGKEVL TSGEFNNPKRRISHLLTMYGFIIFVVTTAILIFAYPTPDDPAPTVVPLLWHLGAAMLAFGGYWFWFSIRVDVASEGVKWY QLNGRGDLFIVGLLGMATFALLWSFTRDVDTLGTLFFVLFVAFSTLLFGSVYWSKFAHMFFKPAAAFQKRVIKADGSREN MPAVYDPSDPDVQARFPDVPAYMGPNPPNMGLGIKREAPSHF
Sequences:
>Translated_282_residues MIDSNPFAELAAFISPTAMQAYVVLMVVLVAVGTILDMLHKKSGQYFFENARRAKRNATRTLSSGEKGALALKTLGKEVL TSGEFNNPKRRISHLLTMYGFIIFVVTTAILIFAYPTPDDPAPTVVPLLWHLGAAMLAFGGYWFWFSIRVDVASEGVKWY QLNGRGDLFIVGLLGMATFALLWSFTRDVDTLGTLFFVLFVAFSTLLFGSVYWSKFAHMFFKPAAAFQKRVIKADGSREN MPAVYDPSDPDVQARFPDVPAYMGPNPPNMGLGIKREAPSHF >Mature_282_residues MIDSNPFAELAAFISPTAMQAYVVLMVVLVAVGTILDMLHKKSGQYFFENARRAKRNATRTLSSGEKGALALKTLGKEVL TSGEFNNPKRRISHLLTMYGFIIFVVTTAILIFAYPTPDDPAPTVVPLLWHLGAAMLAFGGYWFWFSIRVDVASEGVKWY QLNGRGDLFIVGLLGMATFALLWSFTRDVDTLGTLFFVLFVAFSTLLFGSVYWSKFAHMFFKPAAAFQKRVIKADGSREN MPAVYDPSDPDVQARFPDVPAYMGPNPPNMGLGIKREAPSHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31315; Mature: 31315
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSNPFAELAAFISPTAMQAYVVLMVVLVAVGTILDMLHKKSGQYFFENARRAKRNATR CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TLSSGEKGALALKTLGKEVLTSGEFNNPKRRISHLLTMYGFIIFVVTTAILIFAYPTPDD HHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC PAPTVVPLLWHLGAAMLAFGGYWFWFSIRVDVASEGVKWYQLNGRGDLFIVGLLGMATFA CCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHH LLWSFTRDVDTLGTLFFVLFVAFSTLLFGSVYWSKFAHMFFKPAAAFQKRVIKADGSREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MPAVYDPSDPDVQARFPDVPAYMGPNPPNMGLGIKREAPSHF CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIDSNPFAELAAFISPTAMQAYVVLMVVLVAVGTILDMLHKKSGQYFFENARRAKRNATR CCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH TLSSGEKGALALKTLGKEVLTSGEFNNPKRRISHLLTMYGFIIFVVTTAILIFAYPTPDD HHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCC PAPTVVPLLWHLGAAMLAFGGYWFWFSIRVDVASEGVKWYQLNGRGDLFIVGLLGMATFA CCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEECCCCEEEEEECCCCCEEHHHHHHHHHHH LLWSFTRDVDTLGTLFFVLFVAFSTLLFGSVYWSKFAHMFFKPAAAFQKRVIKADGSREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC MPAVYDPSDPDVQARFPDVPAYMGPNPPNMGLGIKREAPSHF CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA