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The map label for this gene is bphP [H]

Identifier: 74318297

GI number: 74318297

Start: 2352009

End: 2353352

Strand: Direct

Name: bphP [H]

Synonym: Tbd_2279

Alternate gene names: 74318297

Gene position: 2352009-2353352 (Clockwise)

Preceding gene: 74318292

Following gene: 74318304

Centisome position: 80.83

GC content: 67.49

Gene sequence:

>1344_bases
ATGACACGGACGCAGGCCATGGCTGCGCGTCGCAACACGGGAATTTCCCGCCCTCACGGGAAATCGGCCCTTTTCTCGAC
GGAGGATTCGATGCGACTGAGGGAATTCATTTTGGAGAACGTCCAGCCGATCCTCAGCGAGTGGGAGGCTTTCGCGGGGA
GCCTCGCGCCGGGCGCGAAGATGACCAAGCTTGCGCTGCGCGATGATGCGGAGTCGATCCTTCTGGCGGCGGCGCGCGAC
ATGCAGGTCGGCCAGAGCGGCGTCCAACAGACGAGCAAGTCTCAAGGGCACGGTGGTGCTGGCGGCGCGGAGAGCGAGCG
GCTCGACGACGCGTCGGCACTGCACGGCGTCGGGCGCGCCGGCTCGGGCTTCGACATCCTGGAGGTGGTCTCGGAATACC
GCGCACTGCGCGCCAGCGTGCTGCGCCTCTGGCGCGAGAGTCTCCCGCAGCCGGACATCGACGACATCGACGACATCACG
CGTTTCAACGAGTCGATGGATCAGTCGCTCGCCACGGCCGTTGGCAGCTACAGCAGGCGCGTGGATCAGTCGCGCCGCAT
GTTTCTCGCGGTCCTCAGCCACGACCTGCGCAACCCGCTGACCTGCATCCGCATGGCCGCTCTGGTTATATCGCGTAGTG
CAGAGGGAAACGCGAAGGCTAGCCGCCTCCTGTCGCAGATCGAGACGAACGCGGACGCGATCAGACGGCTGATCGACGAC
CTGATCGACTTCGCATCGACCGGCCTCGGCAGCGCCATGCCCCTGACGCGCGGGCCGGTGGATCTGGAAAGACTCGGCCG
CGAAGTGGTCGACGCGTCTCGCACCGCGCACCCCGGGCGCACGCTTCGCTTCCACGCCGACGGCGATCTCGCCGGCCATT
GGGATGCGGGCCGACTTCGCCAGGTGGTCTCCAACCTGGTGGGCAACGCACTGCAACACGGGTCTGAAACAGGGGCAGTC
GGGCTGTCGCTCGCGTCAGAAGGGGCTACCGCCGTACTAGCCGTGCACAACGAAGGCGCGCCGATTCCGTCGGAGCTGTT
GGCGACGATCTTCGATCCGCTGGTGCGCTACGCGCCGGACGCGGCTGTGCGGCGCGTCCCGGGCAGCGTCGGGCTGGGCT
TGTACATCGTGCGCGAGATCGTCGTCGCGCACGGGGGCACCGTCGACGTCGTCTCGACAGCACAGGAAGGCACGACGTTC
ACGGCCCGGCTTCCGCGGGCGCAGCCTGCCGAAGACGACAAGCATGGCGACACAAAGGCGGCGGCAAGCGGCGGGGCGGC
GTCGAATTGCGCTCTGCCCACTCCGGGTCGATCCGGCGCAGGAAAGAGGTCAGCCGAGCGGTAG

Upstream 100 bases:

>100_bases
TCGCGACGGCTATGATTGATCGATCCGCTTCGCGCTGCGCCGGACGCGCACTTTCAGGGAAAATACACCGTCGTGTCGCC
GCGGCGGCGGGCGCGGCGGC

Downstream 100 bases:

>100_bases
CTTTGGCCTGCGAACAGCGGGCCCTCGAACTCCTCAAGCTGAAGCTCCGTCCGGCGGTACACCCGTCTCCAAGCCCCGCT
CGGGTCAATCAGTACGACGC

Product: histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 447; Mature: 446

Protein sequence:

>447_residues
MTRTQAMAARRNTGISRPHGKSALFSTEDSMRLREFILENVQPILSEWEAFAGSLAPGAKMTKLALRDDAESILLAAARD
MQVGQSGVQQTSKSQGHGGAGGAESERLDDASALHGVGRAGSGFDILEVVSEYRALRASVLRLWRESLPQPDIDDIDDIT
RFNESMDQSLATAVGSYSRRVDQSRRMFLAVLSHDLRNPLTCIRMAALVISRSAEGNAKASRLLSQIETNADAIRRLIDD
LIDFASTGLGSAMPLTRGPVDLERLGREVVDASRTAHPGRTLRFHADGDLAGHWDAGRLRQVVSNLVGNALQHGSETGAV
GLSLASEGATAVLAVHNEGAPIPSELLATIFDPLVRYAPDAAVRRVPGSVGLGLYIVREIVVAHGGTVDVVSTAQEGTTF
TARLPRAQPAEDDKHGDTKAAASGGAASNCALPTPGRSGAGKRSAER

Sequences:

>Translated_447_residues
MTRTQAMAARRNTGISRPHGKSALFSTEDSMRLREFILENVQPILSEWEAFAGSLAPGAKMTKLALRDDAESILLAAARD
MQVGQSGVQQTSKSQGHGGAGGAESERLDDASALHGVGRAGSGFDILEVVSEYRALRASVLRLWRESLPQPDIDDIDDIT
RFNESMDQSLATAVGSYSRRVDQSRRMFLAVLSHDLRNPLTCIRMAALVISRSAEGNAKASRLLSQIETNADAIRRLIDD
LIDFASTGLGSAMPLTRGPVDLERLGREVVDASRTAHPGRTLRFHADGDLAGHWDAGRLRQVVSNLVGNALQHGSETGAV
GLSLASEGATAVLAVHNEGAPIPSELLATIFDPLVRYAPDAAVRRVPGSVGLGLYIVREIVVAHGGTVDVVSTAQEGTTF
TARLPRAQPAEDDKHGDTKAAASGGAASNCALPTPGRSGAGKRSAER
>Mature_446_residues
TRTQAMAARRNTGISRPHGKSALFSTEDSMRLREFILENVQPILSEWEAFAGSLAPGAKMTKLALRDDAESILLAAARDM
QVGQSGVQQTSKSQGHGGAGGAESERLDDASALHGVGRAGSGFDILEVVSEYRALRASVLRLWRESLPQPDIDDIDDITR
FNESMDQSLATAVGSYSRRVDQSRRMFLAVLSHDLRNPLTCIRMAALVISRSAEGNAKASRLLSQIETNADAIRRLIDDL
IDFASTGLGSAMPLTRGPVDLERLGREVVDASRTAHPGRTLRFHADGDLAGHWDAGRLRQVVSNLVGNALQHGSETGAVG
LSLASEGATAVLAVHNEGAPIPSELLATIFDPLVRYAPDAAVRRVPGSVGLGLYIVREIVVAHGGTVDVVSTAQEGTTFT
ARLPRAQPAEDDKHGDTKAAASGGAASNCALPTPGRSGAGKRSAER

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI87082128, Length=235, Percent_Identity=29.7872340425532, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI145693157, Length=259, Percent_Identity=27.4131274131274, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1786912, Length=251, Percent_Identity=31.8725099601594, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=29.9539170506912, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI87081816, Length=233, Percent_Identity=27.8969957081545, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788393, Length=252, Percent_Identity=25.7936507936508, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789149, Length=222, Percent_Identity=28.8288288288288, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI1790346, Length=230, Percent_Identity=29.1304347826087, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1789808, Length=227, Percent_Identity=28.6343612334802, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786783, Length=222, Percent_Identity=31.0810810810811, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786600, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI48994928, Length=238, Percent_Identity=26.0504201680672, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788549, Length=243, Percent_Identity=27.5720164609054, Blast_Score=63, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47347; Mature: 47216

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTQAMAARRNTGISRPHGKSALFSTEDSMRLREFILENVQPILSEWEAFAGSLAPGAK
CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
MTKLALRDDAESILLAAARDMQVGQSGVQQTSKSQGHGGAGGAESERLDDASALHGVGRA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCCC
GSGFDILEVVSEYRALRASVLRLWRESLPQPDIDDIDDITRFNESMDQSLATAVGSYSRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VDQSRRMFLAVLSHDLRNPLTCIRMAALVISRSAEGNAKASRLLSQIETNADAIRRLIDD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LIDFASTGLGSAMPLTRGPVDLERLGREVVDASRTAHPGRTLRFHADGDLAGHWDAGRLR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHH
QVVSNLVGNALQHGSETGAVGLSLASEGATAVLAVHNEGAPIPSELLATIFDPLVRYAPD
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
AAVRRVPGSVGLGLYIVREIVVAHGGTVDVVSTAQEGTTFTARLPRAQPAEDDKHGDTKA
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHH
AASGGAASNCALPTPGRSGAGKRSAER
HCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRTQAMAARRNTGISRPHGKSALFSTEDSMRLREFILENVQPILSEWEAFAGSLAPGAK
CCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
MTKLALRDDAESILLAAARDMQVGQSGVQQTSKSQGHGGAGGAESERLDDASALHGVGRA
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHCCCCC
GSGFDILEVVSEYRALRASVLRLWRESLPQPDIDDIDDITRFNESMDQSLATAVGSYSRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VDQSRRMFLAVLSHDLRNPLTCIRMAALVISRSAEGNAKASRLLSQIETNADAIRRLIDD
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHH
LIDFASTGLGSAMPLTRGPVDLERLGREVVDASRTAHPGRTLRFHADGDLAGHWDAGRLR
HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHH
QVVSNLVGNALQHGSETGAVGLSLASEGATAVLAVHNEGAPIPSELLATIFDPLVRYAPD
HHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
AAVRRVPGSVGLGLYIVREIVVAHGGTVDVVSTAQEGTTFTARLPRAQPAEDDKHGDTKA
HHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHH
AASGGAASNCALPTPGRSGAGKRSAER
HCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]