| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is 74318252
Identifier: 74318252
GI number: 74318252
Start: 2313147
End: 2313281
Strand: Reverse
Name: 74318252
Synonym: Tbd_2234
Alternate gene names: NA
Gene position: 2313281-2313147 (Counterclockwise)
Preceding gene: 74318254
Following gene: 74318251
Centisome position: 79.5
GC content: 54.81
Gene sequence:
>135_bases ATGAAAAAGCTTCTTGCACTGTTGATGTCGTCGTTCTTTGTCGTCCTGGCGGGCTGCAACACGATGGAAGGCGCGGGCAA GGATATCGAGAGCGGTGGCGAAAAGATTCAGGACGCCGCTGACCGCGACAAGTAA
Upstream 100 bases:
>100_bases GATGGCGCCCGGGCCGGCGCTTAGGATGGATTCGTCATCCGGCGTGTGCCAAAGCGCCCCGCTTGTGACGCATTCAGTCA TGAAACCCTAGGAGAAAACC
Downstream 100 bases:
>100_bases TCCGCAAACGCTGTCCGTTCATTTCAACCCGAGGAGCAACTCATGAATGACACCGCGCGCCCGGCGGCGGGTACCGGCAA GGCGGAAGGGAGCACGGCCG
Product: lipoprotein transmembrane
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 44; Mature: 44
Protein sequence:
>44_residues MKKLLALLMSSFFVVLAGCNTMEGAGKDIESGGEKIQDAADRDK
Sequences:
>Translated_44_residues MKKLLALLMSSFFVVLAGCNTMEGAGKDIESGGEKIQDAADRDK >Mature_44_residues MKKLLALLMSSFFVVLAGCNTMEGAGKDIESGGEKIQDAADRDK
Specific function: Unknown
COG id: COG5510
COG function: function code S; Predicted small secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4690; Mature: 4690
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 9.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 9.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLLALLMSSFFVVLAGCNTMEGAGKDIESGGEKIQDAADRDK CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MKKLLALLMSSFFVVLAGCNTMEGAGKDIESGGEKIQDAADRDK CHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA