| Definition | Thiobacillus denitrificans ATCC 25259 chromosome, complete genome. |
|---|---|
| Accession | NC_007404 |
| Length | 2,909,809 |
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The map label for this gene is trpE [H]
Identifier: 74318246
GI number: 74318246
Start: 2307504
End: 2309069
Strand: Reverse
Name: trpE [H]
Synonym: Tbd_2228
Alternate gene names: 74318246
Gene position: 2309069-2307504 (Counterclockwise)
Preceding gene: 74318247
Following gene: 74318244
Centisome position: 79.35
GC content: 67.11
Gene sequence:
>1566_bases ATGGCGGCGCTCGTCCTGACAAGACGCGCAGCACATTCCCTGACCCCTGAATCCCGGATCCCGACCCCTGCCATGACCGA ACAAGAATTCTTCGACCTTGCCCGCCAGGGCTTCAACCGTATCCCGCTGGTGCGCGAACTGCCCGGCGACCTCGAGACGC CGCTGTCGGTCTATCTCAAGCTCGCCAACGCGCCCTATACCTATCTCCTCGAATCGGTCGTCGGCGGCGAACGCTTCGGA CGCTATTCCTTCATCGGCCTGCCGGCGCGCACCGTGCTCAGGGTGCGCGCCCACCTCCTGACGGTCGAAACCGACGGCCA GGTCGTCGAGGAATGCAGCACGCCCGATCCGCTCGCTTTCATCGCCGAGTATCAGACCCGCTTCAAGGCCGCGCCGGTCC TGGGCTTGCCGCGCTTCACCGGCGGCCTGGCCGGCTACTTCGGCTACGACACGATCCGTTACATCGAGAAGCGACTGACG CCGGAATTCAACAAGAACCTCGTGCGCAAGGACGACGTCCTGCACACGCCCGACATCCTGCTGATGCTGACCGAGGAACT CGCCGTCTTCGACAACCTCGCCGGCAAGCTCTATCTCGTCACCCACGCCGACCCGATGCAGGCGGACGCCTATGCGCAGG GGCACTTGCGGCTCGCGGAGCTTGCCGAGAAGCTGCACGCGCCGGTCACGCTGCCGAGCGAGCCGCGCCCGGTCGTCGCC GAAGCGAGCTCCGAATTCGGCGAAGCCGAGTTCAAGGCCGCGGTTGCCAAGGCCAAGGAGTACATCGCGGCCGGCGACGT CATGCAGGTCGTGCTGTCGCAGCGGATGGCGCGGCCGTTCGAGGCCTCGCCGCTGTCGCTCTACCGTGCGCTGCGCAGCC TCAACCCGTCGCCCTACATGTATTTCTACGACCTTGGCGGCTTCCACATCGTCGGCTCGTCGCCCGAGATCCTGGTCCGG CTCGAGGGCGACACGGTCACGCTGCGGCCGATCGCCGGCACGCGGCCGCGCGGGCTCACGCGCGAGGACGATCAGCGCCT CGCGGCCGAATTGATGGCCGACCCGAAGGAATGCGCCGAACATCTGCAGCTCCTCGACCTCGGGCGCAACGACACGGGGC GGGTCGCCGTGACCGGCAGCGTCAAGGTCACGGAACACATGCAGATCGAGCGCTATTCGCACGTCATGCACATCGTCTCG AACGTCGAAGGCAAGCTCAAGCCCGGACTCTCCGCGCTCGACGTCCTGCGCGCGAGCTTTCCGGCAGGTACGGTCTCGGG GGCGCCCAAGGTGCGGGCGATGGAGATCATCGACGAGCTCGAACCGAGCAAGCGCGGGGTCTACGCCGGCGCCGTCGGCT ACCTCGGCTTCAGCGGCGACATGGATCTCGCGATCGCGATCCGCACGGCCGTCGTCAAGGATGGAATGCTCTACGCCCAG GCCGGCGCCGGCATCGTCGCCGACTCGGTCCCCGACAACGAGTGGACCGAGACGCTCAACAAGGCGCGGGCGGTCGTGCG TGCGGCCGAGCTCGCCTACGCGCGCTTCGGCGACGTCGTCGAATAA
Upstream 100 bases:
>100_bases GCAGTCGTGCCGAGTCTCGCCGAGGCGGCGCTGATGGTGACGAAGGCGTGATGGCAAGGGGGCGGGATTCGGGGATCAGG ATTCAGGGGCCGTGCCGCCG
Downstream 100 bases:
>100_bases GGCGTTTGCCCGGCCCGCCGAAACGCGCGGGCGCTAACTCAGGCCGTAGCGTTTGAGCTTGCGGTACAGCGTGCGCTCGG TGACGCCGAGTGCCTGGGCG
Product: anthranilate synthase, component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MAALVLTRRAAHSLTPESRIPTPAMTEQEFFDLARQGFNRIPLVRELPGDLETPLSVYLKLANAPYTYLLESVVGGERFG RYSFIGLPARTVLRVRAHLLTVETDGQVVEECSTPDPLAFIAEYQTRFKAAPVLGLPRFTGGLAGYFGYDTIRYIEKRLT PEFNKNLVRKDDVLHTPDILLMLTEELAVFDNLAGKLYLVTHADPMQADAYAQGHLRLAELAEKLHAPVTLPSEPRPVVA EASSEFGEAEFKAAVAKAKEYIAAGDVMQVVLSQRMARPFEASPLSLYRALRSLNPSPYMYFYDLGGFHIVGSSPEILVR LEGDTVTLRPIAGTRPRGLTREDDQRLAAELMADPKECAEHLQLLDLGRNDTGRVAVTGSVKVTEHMQIERYSHVMHIVS NVEGKLKPGLSALDVLRASFPAGTVSGAPKVRAMEIIDELEPSKRGVYAGAVGYLGFSGDMDLAIAIRTAVVKDGMLYAQ AGAGIVADSVPDNEWTETLNKARAVVRAAELAYARFGDVVE
Sequences:
>Translated_521_residues MAALVLTRRAAHSLTPESRIPTPAMTEQEFFDLARQGFNRIPLVRELPGDLETPLSVYLKLANAPYTYLLESVVGGERFG RYSFIGLPARTVLRVRAHLLTVETDGQVVEECSTPDPLAFIAEYQTRFKAAPVLGLPRFTGGLAGYFGYDTIRYIEKRLT PEFNKNLVRKDDVLHTPDILLMLTEELAVFDNLAGKLYLVTHADPMQADAYAQGHLRLAELAEKLHAPVTLPSEPRPVVA EASSEFGEAEFKAAVAKAKEYIAAGDVMQVVLSQRMARPFEASPLSLYRALRSLNPSPYMYFYDLGGFHIVGSSPEILVR LEGDTVTLRPIAGTRPRGLTREDDQRLAAELMADPKECAEHLQLLDLGRNDTGRVAVTGSVKVTEHMQIERYSHVMHIVS NVEGKLKPGLSALDVLRASFPAGTVSGAPKVRAMEIIDELEPSKRGVYAGAVGYLGFSGDMDLAIAIRTAVVKDGMLYAQ AGAGIVADSVPDNEWTETLNKARAVVRAAELAYARFGDVVE >Mature_520_residues AALVLTRRAAHSLTPESRIPTPAMTEQEFFDLARQGFNRIPLVRELPGDLETPLSVYLKLANAPYTYLLESVVGGERFGR YSFIGLPARTVLRVRAHLLTVETDGQVVEECSTPDPLAFIAEYQTRFKAAPVLGLPRFTGGLAGYFGYDTIRYIEKRLTP EFNKNLVRKDDVLHTPDILLMLTEELAVFDNLAGKLYLVTHADPMQADAYAQGHLRLAELAEKLHAPVTLPSEPRPVVAE ASSEFGEAEFKAAVAKAKEYIAAGDVMQVVLSQRMARPFEASPLSLYRALRSLNPSPYMYFYDLGGFHIVGSSPEILVRL EGDTVTLRPIAGTRPRGLTREDDQRLAAELMADPKECAEHLQLLDLGRNDTGRVAVTGSVKVTEHMQIERYSHVMHIVSN VEGKLKPGLSALDVLRASFPAGTVSGAPKVRAMEIIDELEPSKRGVYAGAVGYLGFSGDMDLAIAIRTAVVKDGMLYAQA GAGIVADSVPDNEWTETLNKARAVVRAAELAYARFGDVVE
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=392, Percent_Identity=40.0510204081633, Blast_Score=246, Evalue=3e-66, Organism=Escherichia coli, GI1788114, Length=456, Percent_Identity=32.6754385964912, Blast_Score=235, Evalue=4e-63, Organism=Escherichia coli, GI1786809, Length=254, Percent_Identity=29.9212598425197, Blast_Score=93, Evalue=4e-20, Organism=Escherichia coli, GI87082077, Length=249, Percent_Identity=28.9156626506024, Blast_Score=84, Evalue=3e-17, Organism=Saccharomyces cerevisiae, GI6320935, Length=504, Percent_Identity=39.484126984127, Blast_Score=319, Evalue=8e-88, Organism=Saccharomyces cerevisiae, GI6324361, Length=500, Percent_Identity=25.6, Blast_Score=135, Evalue=1e-32,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 57070; Mature: 56939
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALVLTRRAAHSLTPESRIPTPAMTEQEFFDLARQGFNRIPLVRELPGDLETPLSVYLK CCCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH LANAPYTYLLESVVGGERFGRYSFIGLPARTVLRVRAHLLTVETDGQVVEECSTPDPLAF HCCCCHHHHHHHHHCCHHCCCEEEECCCHHHHHHHHHHEEEEECCCHHHHHCCCCCCHHH IAEYQTRFKAAPVLGLPRFTGGLAGYFGYDTIRYIEKRLTPEFNKNLVRKDDVLHTPDIL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHH LMLTEELAVFDNLAGKLYLVTHADPMQADAYAQGHLRLAELAEKLHAPVTLPSEPRPVVA HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC EASSEFGEAEFKAAVAKAKEYIAAGDVMQVVLSQRMARPFEASPLSLYRALRSLNPSPYM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE YFYDLGGFHIVGSSPEILVRLEGDTVTLRPIAGTRPRGLTREDDQRLAAELMADPKECAE EEEECCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH HLQLLDLGRNDTGRVAVTGSVKVTEHMQIERYSHVMHIVSNVEGKLKPGLSALDVLRASF HHHHHHCCCCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC PAGTVSGAPKVRAMEIIDELEPSKRGVYAGAVGYLGFSGDMDLAIAIRTAVVKDGMLYAQ CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHEEEECCCCCCEEEEHHHHHHHCCEEEEE AGAGIVADSVPDNEWTETLNKARAVVRAAELAYARFGDVVE CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AALVLTRRAAHSLTPESRIPTPAMTEQEFFDLARQGFNRIPLVRELPGDLETPLSVYLK CCEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH LANAPYTYLLESVVGGERFGRYSFIGLPARTVLRVRAHLLTVETDGQVVEECSTPDPLAF HCCCCHHHHHHHHHCCHHCCCEEEECCCHHHHHHHHHHEEEEECCCHHHHHCCCCCCHHH IAEYQTRFKAAPVLGLPRFTGGLAGYFGYDTIRYIEKRLTPEFNKNLVRKDDVLHTPDIL HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHH LMLTEELAVFDNLAGKLYLVTHADPMQADAYAQGHLRLAELAEKLHAPVTLPSEPRPVVA HHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC EASSEFGEAEFKAAVAKAKEYIAAGDVMQVVLSQRMARPFEASPLSLYRALRSLNPSPYM CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEE YFYDLGGFHIVGSSPEILVRLEGDTVTLRPIAGTRPRGLTREDDQRLAAELMADPKECAE EEEECCCEEEECCCCEEEEEECCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCHHHHHH HLQLLDLGRNDTGRVAVTGSVKVTEHMQIERYSHVMHIVSNVEGKLKPGLSALDVLRASF HHHHHHCCCCCCCCEEEEECEEEHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCC PAGTVSGAPKVRAMEIIDELEPSKRGVYAGAVGYLGFSGDMDLAIAIRTAVVKDGMLYAQ CCCCCCCCCCHHHHHHHHHCCCCCCCEEEEHHEEEECCCCCCEEEEHHHHHHHCCEEEEE AGAGIVADSVPDNEWTETLNKARAVVRAAELAYARFGDVVE CCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1987141 [H]