Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

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The map label for this gene is pgpA [H]

Identifier: 74318212

GI number: 74318212

Start: 2275135

End: 2275614

Strand: Direct

Name: pgpA [H]

Synonym: Tbd_2194

Alternate gene names: 74318212

Gene position: 2275135-2275614 (Clockwise)

Preceding gene: 74318211

Following gene: 74318213

Centisome position: 78.19

GC content: 69.58

Gene sequence:

>480_bases
TTGCGGCCTGATCTCAGATTCGTCTTCGCGCATCCGGCGCATGCGCTCGCCTTCGGCTTCGGCAGCGGCCTCGCGCCCAG
GGCGCCGGGCACCGTCGGCACGCTGCTCGGCTTGCCCCTGTTCCTCCTGATCGCGGCGTCGGCGCCCGATCTCGCGAACC
GCCTCGTGCTCGTCCTCGCCGCCTTCCTGCTCGGGATCTGGGCCTGCGCACGCACGGGGCGCGCGCTCGGCGTCGCGGAC
CACGGCGGCATCGTGTGGGACGAGATCGTCGCCTTCGCGCTCGTCCTGCTGTTCACGCCGGCGGGATGGGCCTGGACCGC
AGCCGCCTTCGCGCTGTTCCGCCTCTTCGATATCCTTAAACCCTGGCCGATCCGGCTCGCCGACCGGCGCCTCAAGAACG
GTTTCGGCGTCATGTTCGACGATCTGCTCGCGGCGGCCTATGCGATCGCTGCGCTGAAAGGACTGCAATGGCTCGTGTGA

Upstream 100 bases:

>100_bases
CCGGTGACCCGCGTCGGCCGTATCACCGCCGACCCCGGCCTGCAGGTCGTCGGCGCCGACGGCCATGCCCTCGCCATCAC
CCGCACGGGCTACGACCATT

Downstream 100 bases:

>100_bases
GCGACGAAGAACTACACCACCTCGCGGTCGAATTGAGCGAGAAGCTGCGCGCGCGCGGCTGGATGCTCGCCACTGCCGAA
TCCTGCACCGGCGGCTGGGT

Product: phosphatidylglycerophosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD
HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV

Sequences:

>Translated_159_residues
MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD
HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV
>Mature_159_residues
MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLAAFLLGIWACARTGRALGVAD
HGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILKPWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV

Specific function: Specifically hydrolyzes phosphatidylglycerophosphate [H]

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786620, Length=148, Percent_Identity=39.8648648648649, Blast_Score=122, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007686 [H]

Pfam domain/function: PF04608 PgpA [H]

EC number: =3.1.3.27 [H]

Molecular weight: Translated: 17019; Mature: 17019

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLA
CCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AFLLGIWACARTGRALGVADHGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILK
HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
PWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRPDLRFVFAHPAHALAFGFGSGLAPRAPGTVGTLLGLPLFLLIAASAPDLANRLVLVLA
CCCCCEEEECCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
AFLLGIWACARTGRALGVADHGGIVWDEIVAFALVLLFTPAGWAWTAAAFALFRLFDILK
HHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
PWPIRLADRRLKNGFGVMFDDLLAAAYAIAALKGLQWLV
CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]