Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318194

Identifier: 74318194

GI number: 74318194

Start: 2260275

End: 2261417

Strand: Direct

Name: 74318194

Synonym: Tbd_2176

Alternate gene names: NA

Gene position: 2260275-2261417 (Clockwise)

Preceding gene: 74318193

Following gene: 74318195

Centisome position: 77.68

GC content: 73.14

Gene sequence:

>1143_bases
ATGGTGTTGCCGGCGCTGGTATTGCTCGCCCTGACGGTGTTCGCGGCGGCCTTGCTGGCGTCGCCGCACGGCGGGCGCGC
CGCCGTCCTGCACCTGGTATTTGCGCTCGGCGCCATGCCGCTGATATTCGGCGCGATGACGCACTTCATCCCGGTGCTCA
CGCGCAGCCGCGGCGCACCGCCGCGGCTGGCCGCGATTCCGCTCGCGGCCATCGCCGCTGGCGCCCTCGTCGTCGGCTCG
CTCGTCGACCCGCGTTTCGCGGGCGCCCGTCACGCCGCGGCCGGGCTCGGCCTCATGGCGACGACTGCCCTATTCGTCTG
GAGCCGCGGCAGGCGACGGTCGATGCTCGGCCAGGCGCACCCCGGTCTCGCCTGGTACGACGCCGCGCTCGTCTGTCTCA
CTCTCGCGCTCGCGGCGATTCTTGCCGGTGCGATCTGGCCGCAGCAGTGGGGTGCGCTGCGTCGCCTCCACGTTCACCTC
AACACCATCGGTTTCGTCGGCATGACCGCGCTCGGCACGCTCGCGGTCCTGCTGCCCACCGCGAGCGGCAAGCCCGATCC
CGAAGCGGGACCCTGGCTGCGCGCCGATCTGCCGCTCGCCCTGGGCGGCACGCTGCTGACGGCGATCGGCGCGGCGTGGG
CGGAGCCGATCGCCTGGCTAGGTGCGCTGCTCTGGGGGGCGGTGCTGCTGCATGTCGGGCGGCGCTGGGCGCGCCGTTAT
CGCGCCGACATCCTTTCGCTGCACGGCGCCGCGCCGCTGCTCGGTGCCGCCTGGGCCGGCCTGACGCTGAGCTTGGGCTT
CGGCGTCGCCGACGCCGTTCCGGCTCTCGCCGCGTTCGACGCGCAACCGCTCTTCGCCTTCGTCGCCGGCTTTCTGCTGC
CCCTCGTCTCGGGCGCAGCCAGCCAGTTGCTGCCCGTTTGGCTGCGCCCCGGTCAGCAGGGGCCGTGGCACGCCGACCTG
CGCCGTCGCCTCGGTCGCTACGGCGGGGCGCGGGCTGGGCTCTTCCTCGTCGGCGGGATCGCGGCCGGGGTCGGCCTTGC
CTGGGGGCTCGTGCTCGCGGCCGCGGTGCTGATCCTGTTCCTGCTACAAGTCGTGCTCGCGTTGGCTCACGGCACGTCCA
TTCGCAAAAGGAGGCCCTCATGA

Upstream 100 bases:

>100_bases
ACCAACTGCGCGCGCGCTACGGCGAGGGGGTCGAGATCCAGTACTTGCAGCGCGAGCCCGGGCAGATCGTGATCGACTTC
ATTCGCAACTGAGTCTTTCC

Downstream 100 bases:

>100_bases
ACACCCCGGCTTTTTTCGACGCTGCACCGCGCATCGCCGTATACGACCCGCTCGCCGAATTTCTCGGTGCCGCCGACGGC
GGGCGGATCGAGTACGGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS
LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL
NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY
RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL
RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS

Sequences:

>Translated_380_residues
MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS
LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL
NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY
RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL
RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS
>Mature_380_residues
MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAPPRLAAIPLAAIAAGALVVGS
LVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAHPGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHL
NTIGFVGMTALGTLAVLLPTASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY
RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAASQLLPVWLRPGQQGPWHADL
RRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILFLLQVVLALAHGTSIRKRRPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39306; Mature: 39306

Theoretical pI: Translated: 12.41; Mature: 12.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAP
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRLAAIPLAAIAAGALVVGSLVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAH
CCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
PGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHLNTIGFVGMTALGTLAVLLPT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SQLLPVWLRPGQQGPWHADLRRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILF
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQVVLALAHGTSIRKRRPS
HHHHHHHHHCCCHHHCCCCC
>Mature Secondary Structure
MVLPALVLLALTVFAAALLASPHGGRAAVLHLVFALGAMPLIFGAMTHFIPVLTRSRGAP
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PRLAAIPLAAIAAGALVVGSLVDPRFAGARHAAAGLGLMATTALFVWSRGRRRSMLGQAH
CCHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCC
PGLAWYDAALVCLTLALAAILAGAIWPQQWGALRRLHVHLNTIGFVGMTALGTLAVLLPT
CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASGKPDPEAGPWLRADLPLALGGTLLTAIGAAWAEPIAWLGALLWGAVLLHVGRRWARRY
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RADILSLHGAAPLLGAAWAGLTLSLGFGVADAVPALAAFDAQPLFAFVAGFLLPLVSGAA
HHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
SQLLPVWLRPGQQGPWHADLRRRLGRYGGARAGLFLVGGIAAGVGLAWGLVLAAAVLILF
HHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLQVVLALAHGTSIRKRRPS
HHHHHHHHHCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA