Definition Thiobacillus denitrificans ATCC 25259 chromosome, complete genome.
Accession NC_007404
Length 2,909,809

Click here to switch to the map view.

The map label for this gene is 74318176

Identifier: 74318176

GI number: 74318176

Start: 2243785

End: 2244579

Strand: Reverse

Name: 74318176

Synonym: Tbd_2158

Alternate gene names: NA

Gene position: 2244579-2243785 (Counterclockwise)

Preceding gene: 74318177

Following gene: 74318175

Centisome position: 77.14

GC content: 65.91

Gene sequence:

>795_bases
ATGCATCATGCATGCAGAAACCCCATTCGCGCGCGCATGGTCATCGCCACCTTCCGCTTCTACGAAGAACTGAACGATTT
TCTCGCACCGGACCGCCGCAAGCGGGAATTCACCGTGCCCTGCGCGCGGGCGGCGACGACCAAACACATGATCGAGGCGC
TCGGGGTGCCGCACACCGAAGTCGAGCTGATCCTGGTCAACGGCGAGTCGGCGGGTTTCGACCGTCGTCTGCAGGATGGC
GACCGGGTCGCCGTCTATCCGCGCTTCGAGGCAATGGACGTCTCGCCGCTGCTGCGGGTCCGCGAGCGTCCGTTGCGCGA
GACGCGTTTCGTCGCCGACGCGCACCTCGGCGGGCTCGCCCACATGCTGCGCATGCTCGGCTTCGATACGCTGTACGACA
ATCATTTTCACGACGACGCGATCGTTGCGATCTGCGAACACGACGGCCGCATCGTGCTGACGCGCGACCGCGAACTGCTC
AAGCGGCGCAGCGTCACCCACGGCTGCTACATCCATGCGCTGAAATCCGAGGCCCAGTTGCGCGAAGTCGTCGCGCGCCT
CGATCTTGCGCGCAGTGCGCGGCCGTTCACGCGCTGCCTGCACTGCAACGTGCCGCTGCGCACGGTCGACAAGGCGAGCG
TGCTCGACCGCCTGCCGCCTAAGGTGCGCGAGCACTACGCGCATTTTCCCACCTGCGACAGCTGTGGCCGCATCTACTGG
GCGGGCTCCCACTGGCGCAACATGCGCCGCCTGCTCGACGACGTGCTGAGCGGTGAACGGGACAGCGGAACTTAG

Upstream 100 bases:

>100_bases
TGGCGGGTCAACAGTTTTCACCTCGACGCCATGCTCTGGGCACAGCAGATCGGGGATTAGCGTCGAAACGCTGCGCCCGG
TTGTGCAGGCGCGAGGGGCG

Downstream 100 bases:

>100_bases
CGCGCGATGCGACCTCTCTCCCTCCTCCCGGCAAAAGAAAAAAAGCCCATGAAGACCGTAACACCGACGATACTCGCGAG
CCTGATCGGCGCGCTCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG
DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL
KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW
AGSHWRNMRRLLDDVLSGERDSGT

Sequences:

>Translated_264_residues
MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG
DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL
KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW
AGSHWRNMRRLLDDVLSGERDSGT
>Mature_264_residues
MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTEVELILVNGESAGFDRRLQDG
DRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLAHMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELL
KRRSVTHGCYIHALKSEAQLREVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW
AGSHWRNMRRLLDDVLSGERDSGT

Specific function: Unknown

COG id: COG1656

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30457; Mature: 30457

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCC
VELILVNGESAGFDRRLQDGDRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLA
EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
HMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELLKRRSVTHGCYIHALKSEAQL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH
REVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW
HHHHHHHHHHHCCCHHHHHEECCCCHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEE
AGSHWRNMRRLLDDVLSGERDSGT
CCHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MHHACRNPIRARMVIATFRFYEELNDFLAPDRRKREFTVPCARAATTKHMIEALGVPHTE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCHHHHHHHHHHHHHHCCCCCC
VELILVNGESAGFDRRLQDGDRVAVYPRFEAMDVSPLLRVRERPLRETRFVADAHLGGLA
EEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
HMLRMLGFDTLYDNHFHDDAIVAICEHDGRIVLTRDRELLKRRSVTHGCYIHALKSEAQL
HHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCHHHHHHHCCCCCHHHHHHHHHHHH
REVVARLDLARSARPFTRCLHCNVPLRTVDKASVLDRLPPKVREHYAHFPTCDSCGRIYW
HHHHHHHHHHHCCCHHHHHEECCCCHHHCHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEE
AGSHWRNMRRLLDDVLSGERDSGT
CCHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA