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The map label for this gene is ygiQ [C]

Identifier: 74318171

GI number: 74318171

Start: 2239499

End: 2241790

Strand: Direct

Name: ygiQ [C]

Synonym: Tbd_2153

Alternate gene names: 74318171

Gene position: 2239499-2241790 (Clockwise)

Preceding gene: 74318170

Following gene: 74318172

Centisome position: 76.96

GC content: 67.41

Gene sequence:

>2292_bases
ATGACGAACGCACTTTTTTCCCACCGCAAGCACTGGGCCGCGCGCTTCGGCACCGCGCCCTTCCTGCCGATGTCGCGCGC
CGAGATGGCCGCGCTCGGCTGGGACGCCTGCGACGTGATTCTCGTCGCCGGCGACGCCTACATCGACCACCCGAGCTTCG
GCATGGCGCTGGTCGGCCGACTGCTCGAAGCCCAGGGCTACCGTGTCGGCATCATCAGCCAGCCCGACTGGCACTCGGCC
GACGCCTTCCGCGTGCTCGGCCAGCCGACGCTGTATTTCGGCGTCACGGCCGGCAACATGGACTCGATGGTCAACCGCTA
CACGTCGGACCGCAAGATCCGCTCGGACGACGCGTACACGGCCAATGCCGAGCCGAACAAGCGGCCCGACCGTGCCGTCA
CGGTCTACGCGCAGCGCTGCCGCGAAGCCTTCCCGGGTACGCCGGTCATCATCGGCTCGATCGAGGCGAGCCTGCGCCGC
ATCGCGCACTACGACTACTGGTCCGACACCGTACGTCGCTCGGTCCTGCCGGACTCCAAGGCCGATCTGCTGATCTTCGG
CAACGCCGAGCGGGCCTTGCTCGACATCTCGCATCGTCTCGCCAAGGGCGAAAACATCGCCGACATCCGCGACGTGCGTG
GGACCGGCTTCATGGTGGCGCGCGACTGGAAACCGGACGAGGCATGGATCGAGGTCCTCTCGACCGAGCTCGACACGCCG
GGCGCGATCGACGCCCACGTCGATCCCTACGCGATGACACCGGCCGGCCCCACCGCGCAGACACCCGAAGGCACCGCTTC
AATCAAAACGGCGCCGGTGCGCATCGTGCCGAAGGCCGAGCGCCTCGCTGCACGCCAGGAGTTGCGCGCGCGCACGGTCA
TCCGTCTGCCCGACTACGACCAGGTCAGGAACAATCCCGCGCTCTACGCGCACGCGTCGCGCGTATTCCATCTTGAATCG
AACCCCGGCAACGCGCGCGCGCTGCGTCAGGGCCACGGCGAGCGCGACGTCTGGCTCAACCCGCCGCCGATTCCGCTGAC
CACGCCCGAGATGGACGCGGTCTACGACCTGCCCTACGCACGCGCGCCGCATCCGAGCTACGGCGACGCCAAGATCCCGG
CGTGGGAGATGATCCGCTTCTCGATCAACATCATGCGCGGCTGCTTCGGCGGCTGCACCTTCTGCTCGATCACCGAACAC
GAGGGGCGCATCATCCAGAGCCGTTCGGAAGATTCGGTGATCCGCGAGATCGAGGCGATCCGCGACAAGACGCCGGGCTT
CACGGGCGTCATTTCCGACCTCGGCGGACCGACCGCGAACATGTACCGCATGGCGTGCAAGTCCAAGCAGATCGAGCAGT
CCTGCCGCCGCCTGTCGTGCGTGTTCCCGGACATCTGCGAGAACATGACCACCGACCACACGCCGCTGATCCAGATGTAT
CGGCGTGCGCGCGCGGTTCCCGGCATCAAGAAGATCCAGATCAGCTCGGGCCTCCGATACGACCTCGCCGTGCGCTCGCC
GGAATACGTCAAGGAACTGGTGCAGCACCACGTCGGCGGCTATCTCAAGATCGCGCCCGAGCACACCGAAGCCGGCCCGC
TGTCGAAGATGATGAAGCCCGGCATGGGCGCCTACGAGCGCTTCAAGGACATGTTCGAAGCCGCGTCGAAGGCGGTCGGC
AAGAAGCAGTACCTGATCCCTTACTTCATCGCGGCGCACCCGGGAACGACCGACGAGGACATGCTGAACCTCGCGCTGTG
GCTGAAGAAGCACGACTTCCGTCTCGATCAGGTGCAGACCTTCCTGCCGACGCCGATGGCGCTCGCGACGGCGATGTATC
ACACCGAAAAGAACCCGCTGAAAAAGGTGCTCGGCGGCAAGGCCGAGACCGTGCCGGTCGTGCGCCAGGGCCGTACGCGG
CGCCTGCACAAGGCCTTTCTGCGTTACCACGATCCCGACAACTGGCCGCTGCTGCGCCAGGCGCTCAAGGACATGGGGCG
CGAAGACCTGATCGGCAACGGCAAGAAACACCTGATCCCGCTCTACCAACCTGCCGGCACGGGCCGACAGCCCGAGGGCG
CGCGCAGTCCCTGTGCGGCGCGCGCGGCGTCGGGCCAAGCCCACGGATCGAAGGCCGGCGCCGGCAAGCCCGCGGCAAAC
AAGGCCGCTGCGGTCAACACGAGCGCCAGCAAACCGAGCGCCGGCAAGCCCGCGCCCGCCAGCCGCGGACGGCCGCCGCA
GGTGCCCAAGCATCCGCTGAGCCAGCGGCGCGGTGGCGGCAAGTCGCGCTGA

Upstream 100 bases:

>100_bases
CGAACGCGACGCTCGTGTTCGAGGTCGAGCTGCTCGGCGTGAACTGAAGTCCGTCCCGGCGCCCGCCGGGATCGAGCCGT
ACCCCGCCGAACCTTCGAGC

Downstream 100 bases:

>100_bases
GTTCTTTGCCAGTCCCCCGATCCGACATGACGAGCCCGAGCGAAATCCTCCGCGCCAAACTCAATCTCGAAACCGCTCAG
CTCGCGTGGCCCGAACTCGA

Product: Elongator protein 3/MiaB/NifB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 763; Mature: 762

Protein sequence:

>763_residues
MTNALFSHRKHWAARFGTAPFLPMSRAEMAALGWDACDVILVAGDAYIDHPSFGMALVGRLLEAQGYRVGIISQPDWHSA
DAFRVLGQPTLYFGVTAGNMDSMVNRYTSDRKIRSDDAYTANAEPNKRPDRAVTVYAQRCREAFPGTPVIIGSIEASLRR
IAHYDYWSDTVRRSVLPDSKADLLIFGNAERALLDISHRLAKGENIADIRDVRGTGFMVARDWKPDEAWIEVLSTELDTP
GAIDAHVDPYAMTPAGPTAQTPEGTASIKTAPVRIVPKAERLAARQELRARTVIRLPDYDQVRNNPALYAHASRVFHLES
NPGNARALRQGHGERDVWLNPPPIPLTTPEMDAVYDLPYARAPHPSYGDAKIPAWEMIRFSINIMRGCFGGCTFCSITEH
EGRIIQSRSEDSVIREIEAIRDKTPGFTGVISDLGGPTANMYRMACKSKQIEQSCRRLSCVFPDICENMTTDHTPLIQMY
RRARAVPGIKKIQISSGLRYDLAVRSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGMGAYERFKDMFEAASKAVG
KKQYLIPYFIAAHPGTTDEDMLNLALWLKKHDFRLDQVQTFLPTPMALATAMYHTEKNPLKKVLGGKAETVPVVRQGRTR
RLHKAFLRYHDPDNWPLLRQALKDMGREDLIGNGKKHLIPLYQPAGTGRQPEGARSPCAARAASGQAHGSKAGAGKPAAN
KAAAVNTSASKPSAGKPAPASRGRPPQVPKHPLSQRRGGGKSR

Sequences:

>Translated_763_residues
MTNALFSHRKHWAARFGTAPFLPMSRAEMAALGWDACDVILVAGDAYIDHPSFGMALVGRLLEAQGYRVGIISQPDWHSA
DAFRVLGQPTLYFGVTAGNMDSMVNRYTSDRKIRSDDAYTANAEPNKRPDRAVTVYAQRCREAFPGTPVIIGSIEASLRR
IAHYDYWSDTVRRSVLPDSKADLLIFGNAERALLDISHRLAKGENIADIRDVRGTGFMVARDWKPDEAWIEVLSTELDTP
GAIDAHVDPYAMTPAGPTAQTPEGTASIKTAPVRIVPKAERLAARQELRARTVIRLPDYDQVRNNPALYAHASRVFHLES
NPGNARALRQGHGERDVWLNPPPIPLTTPEMDAVYDLPYARAPHPSYGDAKIPAWEMIRFSINIMRGCFGGCTFCSITEH
EGRIIQSRSEDSVIREIEAIRDKTPGFTGVISDLGGPTANMYRMACKSKQIEQSCRRLSCVFPDICENMTTDHTPLIQMY
RRARAVPGIKKIQISSGLRYDLAVRSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGMGAYERFKDMFEAASKAVG
KKQYLIPYFIAAHPGTTDEDMLNLALWLKKHDFRLDQVQTFLPTPMALATAMYHTEKNPLKKVLGGKAETVPVVRQGRTR
RLHKAFLRYHDPDNWPLLRQALKDMGREDLIGNGKKHLIPLYQPAGTGRQPEGARSPCAARAASGQAHGSKAGAGKPAAN
KAAAVNTSASKPSAGKPAPASRGRPPQVPKHPLSQRRGGGKSR
>Mature_762_residues
TNALFSHRKHWAARFGTAPFLPMSRAEMAALGWDACDVILVAGDAYIDHPSFGMALVGRLLEAQGYRVGIISQPDWHSAD
AFRVLGQPTLYFGVTAGNMDSMVNRYTSDRKIRSDDAYTANAEPNKRPDRAVTVYAQRCREAFPGTPVIIGSIEASLRRI
AHYDYWSDTVRRSVLPDSKADLLIFGNAERALLDISHRLAKGENIADIRDVRGTGFMVARDWKPDEAWIEVLSTELDTPG
AIDAHVDPYAMTPAGPTAQTPEGTASIKTAPVRIVPKAERLAARQELRARTVIRLPDYDQVRNNPALYAHASRVFHLESN
PGNARALRQGHGERDVWLNPPPIPLTTPEMDAVYDLPYARAPHPSYGDAKIPAWEMIRFSINIMRGCFGGCTFCSITEHE
GRIIQSRSEDSVIREIEAIRDKTPGFTGVISDLGGPTANMYRMACKSKQIEQSCRRLSCVFPDICENMTTDHTPLIQMYR
RARAVPGIKKIQISSGLRYDLAVRSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKPGMGAYERFKDMFEAASKAVGK
KQYLIPYFIAAHPGTTDEDMLNLALWLKKHDFRLDQVQTFLPTPMALATAMYHTEKNPLKKVLGGKAETVPVVRQGRTRR
LHKAFLRYHDPDNWPLLRQALKDMGREDLIGNGKKHLIPLYQPAGTGRQPEGARSPCAARAASGQAHGSKAGAGKPAANK
AAAVNTSASKPSAGKPAPASRGRPPQVPKHPLSQRRGGGKSR

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0313 family [H]

Homologues:

Organism=Escherichia coli, GI48994917, Length=734, Percent_Identity=60.8991825613079, Blast_Score=917, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR007197
- InterPro:   IPR013704
- InterPro:   IPR022946 [H]

Pfam domain/function: PF04055 Radical_SAM; PF08497 Radical_SAM_N [H]

EC number: NA

Molecular weight: Translated: 84249; Mature: 84118

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS00208 PLANT_GLOBIN ; PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNALFSHRKHWAARFGTAPFLPMSRAEMAALGWDACDVILVAGDAYIDHPSFGMALVGR
CCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHH
LLEAQGYRVGIISQPDWHSADAFRVLGQPTLYFGVTAGNMDSMVNRYTSDRKIRSDDAYT
HHHCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEE
ANAEPNKRPDRAVTVYAQRCREAFPGTPVIIGSIEASLRRIAHYDYWSDTVRRSVLPDSK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCCCC
ADLLIFGNAERALLDISHRLAKGENIADIRDVRGTGFMVARDWKPDEAWIEVLSTELDTP
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCC
GAIDAHVDPYAMTPAGPTAQTPEGTASIKTAPVRIVPKAERLAARQELRARTVIRLPDYD
CCCCCCCCCEEECCCCCCCCCCCCCCEEEECCEEECCCHHHHHHHHHHHHHEEEECCCHH
QVRNNPALYAHASRVFHLESNPGNARALRQGHGERDVWLNPPPIPLTTPEMDAVYDLPYA
HHCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
RAPHPSYGDAKIPAWEMIRFSINIMRGCFGGCTFCSITEHEGRIIQSRSEDSVIREIEAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHH
RDKTPGFTGVISDLGGPTANMYRMACKSKQIEQSCRRLSCVFPDICENMTTDHTPLIQMY
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
RRARAVPGIKKIQISSGLRYDLAVRSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKP
HHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCC
GMGAYERFKDMFEAASKAVGKKQYLIPYFIAAHPGTTDEDMLNLALWLKKHDFRLDQVQT
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHH
FLPTPMALATAMYHTEKNPLKKVLGGKAETVPVVRQGRTRRLHKAFLRYHDPDNWPLLRQ
HCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
ALKDMGREDLIGNGKKHLIPLYQPAGTGRQPEGARSPCAARAASGQAHGSKAGAGKPAAN
HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
KAAAVNTSASKPSAGKPAPASRGRPPQVPKHPLSQRRGGGKSR
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TNALFSHRKHWAARFGTAPFLPMSRAEMAALGWDACDVILVAGDAYIDHPSFGMALVGR
CCCHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCEECCCCHHHHHHHH
LLEAQGYRVGIISQPDWHSADAFRVLGQPTLYFGVTAGNMDSMVNRYTSDRKIRSDDAYT
HHHCCCCEEEEECCCCCCCCCHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCEE
ANAEPNKRPDRAVTVYAQRCREAFPGTPVIIGSIEASLRRIAHYDYWSDTVRRSVLPDSK
CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCHHHHHHHHHCCCCCC
ADLLIFGNAERALLDISHRLAKGENIADIRDVRGTGFMVARDWKPDEAWIEVLSTELDTP
CCEEEECCCCHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCC
GAIDAHVDPYAMTPAGPTAQTPEGTASIKTAPVRIVPKAERLAARQELRARTVIRLPDYD
CCCCCCCCCEEECCCCCCCCCCCCCCEEEECCEEECCCHHHHHHHHHHHHHEEEECCCHH
QVRNNPALYAHASRVFHLESNPGNARALRQGHGERDVWLNPPPIPLTTPEMDAVYDLPYA
HHCCCCCEEEEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
RAPHPSYGDAKIPAWEMIRFSINIMRGCFGGCTFCSITEHEGRIIQSRSEDSVIREIEAI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCHHHHHHHHHHH
RDKTPGFTGVISDLGGPTANMYRMACKSKQIEQSCRRLSCVFPDICENMTTDHTPLIQMY
HHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHH
RRARAVPGIKKIQISSGLRYDLAVRSPEYVKELVQHHVGGYLKIAPEHTEAGPLSKMMKP
HHHHCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHCC
GMGAYERFKDMFEAASKAVGKKQYLIPYFIAAHPGTTDEDMLNLALWLKKHDFRLDQVQT
CCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHH
FLPTPMALATAMYHTEKNPLKKVLGGKAETVPVVRQGRTRRLHKAFLRYHDPDNWPLLRQ
HCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCCHHHHH
ALKDMGREDLIGNGKKHLIPLYQPAGTGRQPEGARSPCAARAASGQAHGSKAGAGKPAAN
HHHHCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCC
KAAAVNTSASKPSAGKPAPASRGRPPQVPKHPLSQRRGGGKSR
CCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 14500782 [H]