Click here to switch to the map view.

The map label for this gene is 74318168

Identifier: 74318168

GI number: 74318168

Start: 2237069

End: 2237608

Strand: Direct

Name: 74318168

Synonym: Tbd_2150

Alternate gene names: NA

Gene position: 2237069-2237608 (Clockwise)

Preceding gene: 74318167

Following gene: 74318169

Centisome position: 76.88

GC content: 67.41

Gene sequence:

>540_bases
ATGAAAACGCTGCTTGCGCTGGCCGGCCGGATCGACGCACTGACCGAACGCGTCGGGCGCATCGTGATCTGGCTGGTTCT
CGTGGCCACGCTCATTTCCGCCGGCAATGCGCTGGTGCGTCACCTCGCCGGCGAGAGTTCGAACGCCTGGCTCGAAATCC
AGTGGTATCTCTTCGGCGCAATGTTCATGCTCGGCGCCGGCTACACGCTCAAGCACAACGGCCACGTGCGCATCGACATC
TTCTACAACCGCTGCGGCGCGCGCGGCCGCGCCTGGATCGATCTCGCCGGCGGCGGGCTGTTCCTGCTGCCGATGGCCGT
GCTGCTCGCCTGGCTGTCCTGGCCGATGTTCCACGAAGCCTGGACGACGCGCGAATTGTCGCCCGACGCCGGCGGCCTCG
TGCGCTGGCCGGTCAAGCTGCTCTTGCCGCTCGGCTTCGCGCTGCTCGCGCTGCAGGGTATCGCCGAAATCATCAAGCGC
GTCGGCGTGCTGCGCGGCGATCTCGTGATGCCCGCGGAAGCGCCCGACGAGGAGGTGTGA

Upstream 100 bases:

>100_bases
GCGACAACCGCCTGAAGGCCGACCCGATTCACGCCAACGCCGCCGGCTATCGCGTCGTCGCCGAGCAGCTGGCCGATTTT
CTCGACGACGCCGGCGCGCT

Downstream 100 bases:

>100_bases
CGACGTGACCGAGATCCTCGTACCGCTGATGTTCGTCGGGCTCGTCGCCTTTCTGCTGATCGGCTATCCGGTCGCGTTCG
CGCTCGCGGCGAACGGTCTG

Product: TRAP transporter, small subunit

Products: NA

Alternate protein names: TRAP Transporter DctQ-Like Membrane Protein; C4-Dicarboxylate Transporter Family Protein DctQ Subunit; TRAP-Type Transporter Small Permease Component; Tripartite Transporter Small Subunit; TRAP-T Family Tripartite Transporter; TRAP Transporter Small Transmembrane Protein; C4-Dicarboxylate Transporter Permease; Tripartite ATP-Independent Periplasmic Transporter; TRAP Mannitol/C4-Dicarboxylate Transporter; Permease Component Of C4 Dicarboxylate Transporter; Permease; TRAP Transporter DctQ Family Protein; Transmembrane Transporter Component; TRAP C4-Dicarboxylate Transport System DctQ Subunit; TRAP Dicarboxylate Family Transporter DctQ Subunit; Small Permease Of TRAP-Type Transporter; Trap-Type Transport System Small Permease Component; TRAP Dicarboxylate Transporter; TRAP-Type Large Permease Component; TRAP Transporter DctQ-Like Membrane Protein Family; Triosephosphate Isomerase (TIM; TRAP-Type Transport System Small Permease Component; TRAP Transporter Small Subunit; TRAP Dicarboxylate Transporter DctQ Subunit; Tripartite ATP-Independent Periplasmic Protein; Permease Protein; Tripartite ATP-Independent Periplasmic; C4-Dicarboxylate Transporter Small Subunit

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MKTLLALAGRIDALTERVGRIVIWLVLVATLISAGNALVRHLAGESSNAWLEIQWYLFGAMFMLGAGYTLKHNGHVRIDI
FYNRCGARGRAWIDLAGGGLFLLPMAVLLAWLSWPMFHEAWTTRELSPDAGGLVRWPVKLLLPLGFALLALQGIAEIIKR
VGVLRGDLVMPAEAPDEEV

Sequences:

>Translated_179_residues
MKTLLALAGRIDALTERVGRIVIWLVLVATLISAGNALVRHLAGESSNAWLEIQWYLFGAMFMLGAGYTLKHNGHVRIDI
FYNRCGARGRAWIDLAGGGLFLLPMAVLLAWLSWPMFHEAWTTRELSPDAGGLVRWPVKLLLPLGFALLALQGIAEIIKR
VGVLRGDLVMPAEAPDEEV
>Mature_179_residues
MKTLLALAGRIDALTERVGRIVIWLVLVATLISAGNALVRHLAGESSNAWLEIQWYLFGAMFMLGAGYTLKHNGHVRIDI
FYNRCGARGRAWIDLAGGGLFLLPMAVLLAWLSWPMFHEAWTTRELSPDAGGLVRWPVKLLLPLGFALLALQGIAEIIKR
VGVLRGDLVMPAEAPDEEV

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19683; Mature: 19683

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLLALAGRIDALTERVGRIVIWLVLVATLISAGNALVRHLAGESSNAWLEIQWYLFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHH
MFMLGAGYTLKHNGHVRIDIFYNRCGARGRAWIDLAGGGLFLLPMAVLLAWLSWPMFHEA
HHHHCCCEEEECCCEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHH
WTTRELSPDAGGLVRWPVKLLLPLGFALLALQGIAEIIKRVGVLRGDLVMPAEAPDEEV
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC
>Mature Secondary Structure
MKTLLALAGRIDALTERVGRIVIWLVLVATLISAGNALVRHLAGESSNAWLEIQWYLFGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCEEEEHHHHHHH
MFMLGAGYTLKHNGHVRIDIFYNRCGARGRAWIDLAGGGLFLLPMAVLLAWLSWPMFHEA
HHHHCCCEEEECCCEEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHH
WTTRELSPDAGGLVRWPVKLLLPLGFALLALQGIAEIIKRVGVLRGDLVMPAEAPDEEV
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA